G207035


Basic Information

Item Value
gene id G207035
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 21482838 ~ 21524192 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280928
ttatttaatataaagtggtacctaaattgttttaaagcagaaaaaaatgggTTCAAGGCCTGTTAAGAGGTTAAAGTAAATTCTATATATTGTTGCTATTGTTTAGCTGGCAGATTTTCTGTTATAgctgaaaacaataaaatgattgTCTGTGATAATCAGCTTTATACACTACAGAATTGATTGAGATTGGTTGAGATTAGGTTGAATCAGGTCTAGAATATCACTTAAATAAGATTTGAGAGGGGAAAGGAAATGAATTAGGTCAGGCAAGTTTTACCTGTtctattttttcaatttttttattttttttttgtttctttttgcaCAGTTGAGTGTTTTGTTATGAGAGTTATTAGAATCAATCACGTGcttctgaataataataaacattccaTCTTTTGTGAACATGCAGCTATACCTTGTATGTAATGTAGATATGAAAAATCCTGTATCTGAAATATTTTGAGTATGAGATATACTGTGTACAGGAGCTTTAGTATTAAACAGGTGCATGGAAACGCTGAGCGCCGAGTGATCCGCATGATGCAGAGACGCTAATTTCTGTTGCTTCAATCTTTGATGCTTCCAGCCTTTGATTTTGAACTGCCATTACactggcttgcaaaagtattcataccccttgaactttttacacattttgccaccttacaaccacaaacttaaatgtattttattgagattttcagtgatagacaaacacaaagtattgcataactGTGAAGTAGAATGCAAATTATACATACAGTTTTTTCCAAAcgttttatcaaataaaaatctttaaaaaaaaaagtgtgacgtgcgAAAGTGTTCAGCCCCCTTACATAAAATTcagtgcaatcaactgccttTAGAagtcaattaattatttaatatagtccaactgtgtgtaatttagactcagtataaataaaaacacctgtttttttttttttttttttgaagtccTCTGTGGTTTGTTAGaaaaacactagtgaacaaacagcatcataaagaccaAAGAACTCATCAGACATAAAGTTGAGATAAAATGGCCATGATCCAACCAAAGagacagatcaagcaaggagagcacgGGGTCAGAAAAGCAGCCAAggggcccatggtcactctggaggagctgcagaaatcagcACTACACAAATATGACCTTAATGGAAGAGTGTCGAGAAGAaatccattgttaaaagaaacaaataaatagctgtttatgttttttcagttgcagcAAAGATGTGTaaaaaggtgctgtggtcagataagACCTATGTTGAACTttctggcctaaatgcaaagcgctATATATGGGgaagaaaagtaacactgcatacttttgcacgtcacattttttttttttagaaatcatttttattccacttcacatgtatgcaatactttgtatttgtctattacttaaaaatttaagtttgtggttctaaggtgacaaaatgtgcaaaagttcaaggggtatgaataacTTGGTTAATGAGGCAGCGGCAGTGGAATAATTGAACACGTTTGAGTTGCAGTGTTTGAGTTGAGTTTCTGACTGTAGGGCAGCCGTTCAGTCGTAAATTTGTGTGTTAACACCGTGCCACTGATGACGCTGGTGAATATCTACTGATGAACGCAATGCGCCGTCGTCGTGTGTCCCCGTGCATATTATTAGAACACTTGCAAATTAGTGGGAAAACAAGTTTCTTCGGTTCGCTCTGTGATGACAGCAGACAAGCAGCGTGTGCcgcatttatttgaaaaaaaaattcgtTTAGCCTCCTTCCGAGTGAGAAAATGCTGCATTTAGTCTGATTTCATCATTAAAGTGACAAATTTCAGACGGCGTCAAAAAAAAGGTAGAATTTGGAACAGCTTTCCAGACCGAGGCAGATAATAGGGAATGAATGGAGGTGAATGCAGGGTCATGCTTCAAAGATGACAGCACATAAAAAGCATGTGCTCGTTTTGTTGCAACTTATTCTGTGCCCATTTACAAAATGAACATATGATTAGGGCCTGAAACATACTTCACACCAGGATGCAAAGCAGATGCTTCAAGCTACACAGATTGGATTTTATGCGTAGTTGCTTTCAGAAACGTTTCACAACACATTTCATAATGCAACCCAGAGGAAATCTGCATTCTGAGCACTGCCACGAGCCAAGTTTTCTTGTGTCTAACAGATTTGCATCCTTTCCTTTCCGATGAACGTTTAGACCATACTGCACTTGGTTCCTACTCTTAACAATGTGATTATGAACATCGCATCTCAtttgcatctcaaaaaagtttaatatcatataagaccaattggtacttttggctgtgtgggcagtgtgccaagtcctgctggaaaatgaaatctgcatctccattggatgttttttttaccctttccactcttcctccagactctggtaccttgatttacaaatgaaatgcaaaatttactaatgattagtgatggtttggagagacatgtcatctgctggtgttgatccactgtgttttattatcaagtctaaagtcagtgcagttttgttttcccacaaaatcttacagcacttcatgcttcccttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280928 True 2599 lncRNA 0.37 2 21482838 21524192

Neighbor

gene id symbol gene type direction distance location
tenm1 tenm1,LOC105906218 coding downstream 127201 20980755 ~ 21355637 (-)
hdx hdx coding downstream 682311 20786014 ~ 20800527 (-)
LOC103041461 chmp1b,LOC101476317 coding downstream 1041342 20433525 ~ 20441496 (-)
itm2a itm2a coding downstream 1100828 20372886 ~ 20382010 (-)
cysltr1 cysltr1,LOC107703837,LOC107576072,LOC107591877,LOC107688612 coding downstream 1238349 20239867 ~ 20244489 (-)
LOC103037071 arhgef9,LOC108436700,LOC108269078 coding upstream 6568 21530760 ~ 21599719 (-)
LOC103036462 LOC108436702,LOC105906303,LOC106604272 coding upstream 88641 21612833 ~ 21617288 (-)
LOC103036162 zc4h2,LOC103036162,LOC108436709,LOC108269407 coding upstream 99052 21623244 ~ 21630047 (-)
LOC103037493 NA coding upstream 438351 21962543 ~ 21976174 (-)
LOC103032567 NA coding upstream 512239 22036431 ~ 22042385 (-)
G207000 NA non-coding downstream 78140 21404457 ~ 21404698 (-)
G206998 NA non-coding downstream 85910 21396714 ~ 21396928 (-)
G206991 NA non-coding downstream 274034 21201173 ~ 21208804 (-)
G206912 NA non-coding downstream 757467 20717949 ~ 20725371 (-)
G206859 NA non-coding downstream 945438 20533580 ~ 20537400 (-)
G207033 NA non-coding upstream 3503 21527695 ~ 21530231 (-)
G207068 NA non-coding upstream 162240 21686432 ~ 21687675 (-)
G207218 NA non-coding upstream 291074 21815266 ~ 21815650 (-)
G207232 NA non-coding upstream 422637 21946829 ~ 21948628 (-)
G207242 NA non-coding upstream 476049 22000241 ~ 22012713 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other downstream 699854 20677453 ~ 20782984 (-)
LOC103040850 hmgn5 other downstream 970551 20463703 ~ 20512287 (-)
LOC103040644 LOC108443111 other downstream 1207933 20107097 ~ 20274905 (-)
LOC103046671 NA other downstream 1488036 19925031 ~ 19994802 (-)
LOC103034681 LOC108436714 other upstream 239912 21764104 ~ 22247113 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other upstream 455607 21979799 ~ 21982730 (-)
LOC103035944 mical3 other upstream 1361240 22885432 ~ 22956024 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other upstream 1696277 23220469 ~ 23412954 (-)
dnajc24 dnajc24 other upstream 2414733 23938925 ~ 24020314 (-)

Expression


Co-expression Network