G207068


Basic Information

Item Value
gene id G207068
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 21686432 ~ 21687675 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU280974
TATATTGAAAATATGCCTCAAGCTCTTTCTCTTCTGTGATTGGGATAAaagttctgctgtttctactgtaaCCACTAGAGGGGTCTGCAGGGTTGGGTGATGGTACTGAATATGGGTCTCAGTGCTGGAAGCATTTTTACGCTATAGGATATACTTGGCTTAAAAGTCTGAGATTTACAAAGGAGCATTGATCATATACACCATAAAAAGACCCAATAAATGAGCACGAAAGTCCACAAGTACCCATCTTTTATGTAGCAGGAGATGCATGAAAGATGTTTACTTTGCTTTATTCACACCAGACATCATTTATCAGTCATATAGAGAGGTCATCTGACCTGAAAGGAGACAAATTGCATAAGTTTACAGCTGCATTCAAAACTGTTCTCTATTATATAAATGTGCGTGCTGTGTTGCCAGTATGTCAGTGAAGTAGCAGTAATAACAGTACAATTTACAGCTTTTCCACAGTCAGTTTACTAAATACTAATCaatatatagttaatatatagtgaaatattcttttaaataaattcttTCTCAAACCTACTTCCCACAACATTGGAAATAGCACCCTATTGTgtgcaaaaattatttttacttaattaaatattttgttaagtatttttttattcattaagatTGTCTattgcaggggtgtccaaactacggcccgcgggacgctcattttagaaatagaatgaaagttggcccactgttaagcaggtttttataatgtgagatttaaagtttgaacgctaggcgtcaaaaacgggccaaagagtctaaaagcggagagggtgcacatttctagcgcagaaaaacggggcaaagaagtctaaaagcggagagagtgtgcatttctagagcagaaaaatggggcaaagagtctaaaagaggagagagtgcgcatttctagcgcagaaaagtggtgcaaagagtctaaaagcggagagggtgcgcatttctaacacagacaaacgggccaaagagtctaaaagcggagagagtgcgcatttccggcgcagaaaaacgggccaaagagtctaaaagcggagagggtgcgcatttctaacgcagaaaaacgggccaaagagtctaaaagttgccgtaattaaggagttttatattaagagacatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU280974 True 1141 lncRNA 0.39 2 21686432 21687675

Neighbor

gene id symbol gene type direction distance location
LOC103036162 zc4h2,LOC103036162,LOC108436709,LOC108269407 coding downstream 56385 21623244 ~ 21630047 (-)
LOC103036462 LOC108436702,LOC105906303,LOC106604272 coding downstream 69144 21612833 ~ 21617288 (-)
LOC103037071 arhgef9,LOC108436700,LOC108269078 coding downstream 86713 21530760 ~ 21599719 (-)
tenm1 tenm1,LOC105906218 coding downstream 330795 20980755 ~ 21355637 (-)
hdx hdx coding downstream 885905 20786014 ~ 20800527 (-)
LOC103037493 NA coding upstream 274868 21962543 ~ 21976174 (-)
LOC103032567 NA coding upstream 348756 22036431 ~ 22042385 (-)
cnot1 cnot1 coding upstream 365549 22053224 ~ 22076039 (-)
kdm7a kdm7ab,LOC108442737 coding upstream 394866 22082541 ~ 22120137 (-)
LOC103030564 NA coding upstream 702081 22389756 ~ 22392072 (-)
G207038 NA non-coding downstream 116843 21494614 ~ 21569589 (-)
G207033 NA non-coding downstream 156201 21527695 ~ 21530231 (-)
G207035 NA non-coding downstream 162240 21482838 ~ 21524192 (-)
G207000 NA non-coding downstream 281734 21404457 ~ 21404698 (-)
G206998 NA non-coding downstream 289504 21396714 ~ 21396928 (-)
G207218 NA non-coding upstream 127591 21815266 ~ 21815650 (-)
G207232 NA non-coding upstream 259154 21946829 ~ 21948628 (-)
G207242 NA non-coding upstream 312566 22000241 ~ 22012713 (-)
G207243 NA non-coding upstream 328925 22016600 ~ 22034647 (-)
G207269 NA non-coding upstream 639227 22326902 ~ 22376687 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other downstream 903448 20677453 ~ 20782984 (-)
LOC103040850 hmgn5 other downstream 1174145 20463703 ~ 20512287 (-)
LOC103040644 LOC108443111 other downstream 1411527 20107097 ~ 20274905 (-)
LOC103046671 NA other downstream 1691630 19925031 ~ 19994802 (-)
LOC103034681 LOC108436714 other upstream 76429 21764104 ~ 22247113 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other upstream 292124 21979799 ~ 21982730 (-)
LOC103035944 mical3 other upstream 1197757 22885432 ~ 22956024 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other upstream 1532794 23220469 ~ 23412954 (-)
dnajc24 dnajc24 other upstream 2251250 23938925 ~ 24020314 (-)

Expression


Co-expression Network