G207232


Basic Information

Item Value
gene id G207232
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 21946829 ~ 21948628 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU281188
gtggaacaacacaaaaaaacagagagaaatataaaataaataaaaaaaacagccagaCAAAATGATTGgcacatttaaattaatatttggttgcccataaaaaaataactgacaTCAGTTGCTTCCTATAACCATCAACAAGCTTCTTACAAAGTAAGTATGTTTCaaatattccaaaaaaaataactttggaacaaattttatttaaacaaaatcaaaatcaaaaacaaaaagatgtcAATGTGACAGTAAATATCAAGCATCATATTTTTCGCTTAAAGTGCATGAAGAAGCACAATACTTTACACTGCAGGACACCAAGTCTGGATTACGCTTTACATCCACTTGTTTTTTTCACACGTGTAAAAATGCACAATGTAGCTGAATCATACATttcaagcaaacaaacaaacaaaccaccCACAAGTGGGCATGTTCCCAACTACAAAATGACACAGCCCATTAGGTTTAGGGTCAGTTGTGAGTTGAGGTACACCTGCTCTCTTTTAGGCTCTTTTTTTACCACCCAACTGACCTTCAATGAAATGTTatctattttacaataaacaaaaaatgcatcTAAAAATATTCTATAAATCATTAAATCGTTGTTGCAAACAAATCTTGCTTTGGATGTCCTTTAGTTTTTAACTATTTGAACCTGGCAGCCTTCCTTTACATTGTGTATTCAAGCCTTTTTACACAGAAATACAGTcaaaatgttttctctttctggAAAGTtgcaattttttacatttttttgcaagTTTTTACATATATAGCTAAACTGCAGAGTAAAAATGGCTTTATTGTGTACATTTCCCCTGCCAATGCTAAACAAGTACTGCTATTTTAAGCAGATTCACAAGCTATTGGAGTGCGTGAAAAATTCAGACAGAGAATAGATGGATAGTCTGAGCATTATTCATTACAAAACAGGGACTAGATACACTGCATCATCTTTATAAATGCTTTGATCTATATATCCTGACGATTCCTAATTCCACCAagttctttaaaataaactgcAAATCCAGTCTTTTGACTTTTGACCAGATAAATCATGAATGACTTAAAACCAGCTGCTGTCTGTTCATGCTGTTCATGAGAAGTATATAAAAGCCAGGCTTCTCCTGAATAAACACGAGGTCAAAGTAGGTTTATTACAACCTGATGAATCACACACCAAAATTACATATTTGGATACGGGCGATTTTGTGTAGTTTTGTTTGTGTACATGGAacagaaatatacatttatacaatttAAGCAAGATCAAATGGTCAGTGatacaaaataaactataaaataaaccaaacataaatgaataaagggaCAGGTGATGCAACTGCAAACAAGATAATAAGCATTATAACAtttcaacaaaaaacagaatagaTTGGAAACTTGCAGCTCACAATGTGTGTTGTCTTGATTTGACTAACAGGAAATATGTTAATCATGAATTCTGAACATTCAGGTCAGACTGTGTTCATGTTACAACAGTCTGTGTCATTTTCTGCTTTGAGAGTAACAGGAGATAAGATACTTCTCCCATTCCACTGATTGCTTTCTTGACTGCTTTTGGGCATGGCTCCTTTTCGGTCCCGCAGTCTTCATTTGAGAATGCCTAGCGTGTCCATTTTGAGCCAGTCTGAGGGATAAGGAAGCACCTCTCctgtaataaaaagaaaattaaggcTAGTGATCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281188 True 1714 lncRNA 0.34 2 21946829 21948628

Neighbor

gene id symbol gene type direction distance location
LOC103036162 zc4h2,LOC103036162,LOC108436709,LOC108269407 coding downstream 316782 21623244 ~ 21630047 (-)
LOC103036462 LOC108436702,LOC105906303,LOC106604272 coding downstream 329541 21612833 ~ 21617288 (-)
LOC103037071 arhgef9,LOC108436700,LOC108269078 coding downstream 347110 21530760 ~ 21599719 (-)
tenm1 tenm1,LOC105906218 coding downstream 591192 20980755 ~ 21355637 (-)
hdx hdx coding downstream 1146302 20786014 ~ 20800527 (-)
LOC103037493 NA coding upstream 13915 21962543 ~ 21976174 (-)
LOC103032567 NA coding upstream 87803 22036431 ~ 22042385 (-)
cnot1 cnot1 coding upstream 104596 22053224 ~ 22076039 (-)
kdm7a kdm7ab,LOC108442737 coding upstream 133913 22082541 ~ 22120137 (-)
LOC103030564 NA coding upstream 441128 22389756 ~ 22392072 (-)
G207218 NA non-coding downstream 131179 21815266 ~ 21815650 (-)
G207068 NA non-coding downstream 259154 21686432 ~ 21687675 (-)
G207038 NA non-coding downstream 377240 21494614 ~ 21569589 (-)
G207033 NA non-coding downstream 416598 21527695 ~ 21530231 (-)
G207035 NA non-coding downstream 422637 21482838 ~ 21524192 (-)
G207242 NA non-coding upstream 51613 22000241 ~ 22012713 (-)
G207243 NA non-coding upstream 67972 22016600 ~ 22034647 (-)
G207269 NA non-coding upstream 378274 22326902 ~ 22376687 (-)
G207275 NA non-coding upstream 428492 22377120 ~ 22377638 (-)
G207282 NA non-coding upstream 453745 22402373 ~ 22402783 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other downstream 1163845 20677453 ~ 20782984 (-)
LOC103040850 hmgn5 other downstream 1434542 20463703 ~ 20512287 (-)
LOC103040644 LOC108443111 other downstream 1671924 20107097 ~ 20274905 (-)
LOC103046671 NA other downstream 1952027 19925031 ~ 19994802 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other upstream 31171 21979799 ~ 21982730 (-)
LOC103035944 mical3 other upstream 936804 22885432 ~ 22956024 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other upstream 1271841 23220469 ~ 23412954 (-)
dnajc24 dnajc24 other upstream 1990297 23938925 ~ 24020314 (-)
G207707 polr2c other upstream 2576106 24524734 ~ 24529067 (-)

Expression


Co-expression Network