G207333


Basic Information

Item Value
gene id G207333
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 22688740 ~ 22689592 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU281316
tttctttttttttttttTTCCTGGCTTTGGGATCTTTATTGTCAGTTTCTACACAACATTAATTGTAATCATATTAAGAATTGTCACGGACATATTTCATGATATATTTGAGACCCAGCCAGGTCTCAGATGCAGTTGGGATGATCTGATTGGCAGGCAGGAGGAAACCATAGCGGCCAGTGTCACGCAGCTCAAAGGCAAATGAGTATTTGATGCCAATGTCATATGACCAGTCAATGCTTCCACCACTGGCTTGATCTGTGGgattagaataaaa

Function

GO:

id name namespace
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process
GO:0004982 N-formyl peptide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281316 True 277 lncRNA 0.40 2 22688740 22689592

Neighbor

gene id symbol gene type direction distance location
LOC103026420 atp6v1e1,LOC107707480,LOC107701013,LOC108269194,LOC107575294,LOC107732807,LOC108442797,LOC102197685 coding downstream 5644 22676368 ~ 22683096 (-)
LOC103027200 NA coding downstream 41796 22602626 ~ 22646944 (-)
LOC103027701 cecr1 coding downstream 87277 22591032 ~ 22601463 (-)
c24h12orf4 cunh12orf4,c8h12orf4,LOC107707474,LOC107700900,LOC107732788 coding downstream 211477 22460046 ~ 22477263 (-)
LOC103030249 zgc:77158,LOC108442730,LOC107572640,LOC107732819,LOC107575189,LOC107700881,LOC107686625 coding downstream 236709 22407392 ~ 22452031 (-)
LOC103024959 NA coding upstream 92034 22781626 ~ 22789752 (-)
LOC103024231 tead1,LOC108269170,LOC105016886,LOC105018259,LOC106587195 coding upstream 101975 22791567 ~ 22820926 (-)
LOC103023692 parvaa,LOC108441481,LOC108269306,LOC107686640,LOC107573077,LOC103142483,LOC105910371,LOC107589155,LOC107707483 coding upstream 178830 22868422 ~ 22883036 (-)
LOC103023170 far1,far2,facr1 coding upstream 287961 22977553 ~ 23013180 (-)
rep15 NA coding upstream 362781 23052373 ~ 23053260 (-)
G207315 NA non-coding downstream 104939 22582766 ~ 22583801 (-)
G207272 NA non-coding downstream 282211 22404280 ~ 22406529 (-)
G207282 NA non-coding downstream 285957 22402373 ~ 22402783 (-)
G207275 NA non-coding downstream 311102 22377120 ~ 22377638 (-)
G207269 NA non-coding downstream 312053 22326902 ~ 22376687 (-)
G207505 LOC108441495 non-coding upstream 17842 22707434 ~ 22709445 (-)
G207506 NA non-coding upstream 22285 22711877 ~ 22735025 (-)
G207511 NA non-coding upstream 54346 22743938 ~ 22745827 (-)
G207514 NA non-coding upstream 73806 22763398 ~ 22863017 (-)
G207536 NA non-coding upstream 361474 23051066 ~ 23052067 (-)
LOC103034681 LOC108436714 other downstream 441627 21764104 ~ 22247113 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other downstream 706010 21979799 ~ 21982730 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other downstream 1905756 20677453 ~ 20782984 (-)
LOC103040850 hmgn5 other downstream 2176453 20463703 ~ 20512287 (-)
LOC103040644 LOC108443111 other downstream 2413835 20107097 ~ 20274905 (-)
LOC103035944 mical3 other upstream 195840 22885432 ~ 22956024 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other upstream 530877 23220469 ~ 23412954 (-)
dnajc24 dnajc24 other upstream 1249333 23938925 ~ 24020314 (-)
G207707 polr2c other upstream 1835142 24524734 ~ 24529067 (-)
G207772 NA other upstream 2258539 24948131 ~ 24948851 (-)

Expression


Co-expression Network