G207772


Basic Information

Item Value
gene id G207772
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 24948131 ~ 24948851 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU281979
AAGACTGGATTTCAGAGCAACGGAATGATCCAACCATCAATCGTGTTATTTCTCTCATAACTTCTGGGAAAAGAGTGTCTTACAGAGCCAAACAGCGAGAAGACAGAGAAGTGCAGTTGTTGCTAAGAGTGAGAGATCAGCTTGTCCTAGACAATAATGTGCTCTATCGAAGGCGAATGGTTAGAGGTGAGCCGTCTTTTCAGCTCGTTCTTCCAAAAACGTATCGCCAAATAGCTCTTGACAATCTCCATGATTCCATGGGACACATGGGAATTGACAGAACACTTGATCTTGTCCGTACCAGGTTCTACTGGCCACACATGCAAGTTGAGGTGGAAAAGAAAGTCAGAACCTGTGAACGCTGTATTCGTCGAAAAGCTGCTGCGGAAAGAAGCGCTCCGCTTGTCAACATTAGAACTAGCAGACCTATGGAGTTAGTCTGTATTGATTACCTCTCATTAGAGCCAGATCGTAGAGGGACGAAAGACATTCTTGTTATCTCTGACCATTTCACGAAGTATGCAGTCGCTGTTCCCACTTCGGACCAAAAAGCGAAGACCGTGGCCAAGACTCTATGGAACAGTTTTTTCATTCACTATGGATTCCCTGAACGGCTACATAGTGATCAAGGTCGCGATTTTGAGTCTGCTTTGATAAAAGAGCTGTGTCAACTACTTGGAATTAAAAAGACTCGTACCACTCCCTACCATCCGAGATGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281979 True 721 TUCP 0.45 1 24948131 24948851

Neighbor

gene id symbol gene type direction distance location
LOC103042358 chst1,LOC108428115,LOC107714082,LOC107572125,LOC107654173,LOC107707501,LOC107674940 coding downstream 37358 24904570 ~ 24910773 (-)
LOC103044011 NA coding downstream 117168 24813330 ~ 24830963 (-)
LOC111195752 LOC108428077 coding downstream 160108 24779413 ~ 24788023 (-)
LOC103042272 zgc:86725,actc1,LOC105902989,LOC108428114,LOC108269395,LOC105895662,LOC106561611,LOC105018274 coding downstream 173980 24757231 ~ 24774151 (-)
LOC103031505 shank2,LOC108411910,LOC107572162 coding downstream 201135 24532648 ~ 24746996 (-)
c24h11orf49 cunh11orf49,c8h11orf49,zgc:92873,LOC107707434 coding upstream 195140 25143991 ~ 25150989 (-)
drc7 NA coding upstream 263714 25212565 ~ 25231011 (-)
ccdc113 NA coding upstream 321290 25270141 ~ 25277760 (-)
LOC103040081 snrkb,LOC108413384,LOC108268812,LOC107674965,LOC107589179,LOC107571964,LOC107714071 coding upstream 463335 25412186 ~ 25452091 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding upstream 547450 25496301 ~ 25572271 (-)
G207768 NA non-coding downstream 1603 24897302 ~ 24946528 (-)
G207767 NA non-coding downstream 55868 24891733 ~ 24892263 (-)
G207763 NA non-coding downstream 135179 24812654 ~ 24812952 (-)
G207706 NA non-coding downstream 370525 24530725 ~ 24577606 (-)
G207705 coq9,LOC107707431,LOC107099699,LOC107589199 non-coding downstream 427382 24517463 ~ 24520749 (-)
G207781 NA non-coding upstream 13721 24962572 ~ 25045617 (-)
G207881 ckap5,LOC108269026 non-coding upstream 204777 25153628 ~ 25166678 (-)
G207874 ckap5,LOC108269026 non-coding upstream 242386 25191237 ~ 25193673 (-)
G207886 csnk2a2,csnk2a2b,LOC106573643 non-coding upstream 330514 25279365 ~ 25299692 (-)
G207926 NA non-coding upstream 481153 25430004 ~ 25430323 (-)
G207707 polr2c other downstream 419064 24524734 ~ 24529067 (-)
dnajc24 dnajc24 other downstream 927817 23938925 ~ 24020314 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other downstream 1535177 23220469 ~ 23412954 (-)
LOC103035944 mical3 other downstream 1992107 22885432 ~ 22956024 (-)
LOC103034681 LOC108436714 other downstream 2701018 21764104 ~ 22247113 (-)
usb1 NA other upstream 302384 25251235 ~ 25260167 (-)
G207903 NA other upstream 368151 25317002 ~ 25352674 (-)
G207940 NA other upstream 643780 25592631 ~ 25733304 (-)
LOC111195756 NA other upstream 970369 25919220 ~ 25938032 (-)
LOC111195825 NA other upstream 1040587 25989438 ~ 25992494 (-)

Expression


Co-expression Network