CI01000009_13798741_13799037


Basic Information

Item Value
gene id CI01000009_13798741_13799037
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13796884 ~ 13799191 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_13798741_13799037.mRNA
CTATAAAAAAGTTGCTGACAATTTAGTGACAATCCTAAATCATTTTTATGGTAAACGGATACTGACTGTTGTAAAAATCTGAAAGTAATATTTACAATGTTGCCATGGCCATTATGACTTGCTAACGAGGCTCAATGGCACATGTGCCATCTTCTCCGGTTTAGCGGTCATTAAAGGGGTCATGAATTGAGAAATCAACTTTTCCTTGAGCTTTTGATATATAAGAGGTCATCGTACTATAAGAATATCCTGTAAGTTTCAGAACTGAAAACTTCCTTGTTAGTCCAATAAAAGCTTTTATTGACACCAGGCCCAGCGTACGATCTGATCTGACAGGTGAAACCCCGCCTCCGCAGAAGAAATCAACACCTACTTCTTCAATGCAATATTAGCCCCGCCCACTGCCGTGTTAGTGAGATGAGGAGGAGAGGAGAGCGATACAGGACTAAAAATAACATTATCTTTCAAAGGATCCTTATGCCAGGAATATGGTTATTTTCAACAATGTGAATGTCTCAGTTGAGCTTTATTTATTAGTATTTGGTATTTCACTGTGGATACTTTGGTAAATCAATTACATTTCGGCGATGAAAATAATCTGTTATTTAAACGATGATTAAATTATATAAAGAAAGCGATCAAAGAACGCTCCCTTTACAATCGCTGGAGCTGTCAATCAAACTGCGCGAGTTTATCAGTGACTGAGTTCTGGACTCGCGCCAAAACTCCTGTTTTATTCAATGAATCTCTTAGTTATATCGCGTTTGCACTGTTAGTTATGATGAAAGCATTCGTTAGTGTGCAGAAATTGAGTTACAATGATGAGATCACTGCTTTCAACAACATGTCTGTGATTGGCTGTTCATCACTGCGACCTTTCATGCCATGATCTAAATGTAATGCAGCACTTTTCACGATTAGTTAACCTTGAGAGCTGTAATAGTAAAAATGTGCTAAAAGAGAGAGTAATACTTGGCTTTTTTAAATGTAAAGATGTTAGCCAATCACAGCAGTGGGCGTTTACACTGAAGTCTCACAGCAGACACGCCCCTTAAAACAGCGTTCAAATCAGAGGGCTAAAATCATGGTAGCAAAAATGCCTTTTATTTCTAAATTATGACAATTTTTTATGTATAAAAGCATACTATAAGTGCACCCCAGGAAACATTATAAAACAATAAAACAACGCCGTTTATGACCCCTTTAAACAGAAATATTTGATAGAACAAAGTAATCGACCAATTAGAAACAAGCATTCCAAAGAACTGTGTGAATACGACTGTAAACTTAGCTGAAAAACACACGAGATGAAGTATGACGGGTTGACAGACACCATCCTGTCAAGTGGTTTCAGAGCACAGGCACTTAGACTGACTGTATTTTTGGAGACTTTGCCATGGCCCCTGACACAGTGTACCGGGGAGGGTCTTCAGACCACTGCGAGTGTATGGAAATCAAAACAAGCATCTAAAAGAAGCCTGTCTGGAAATGGATAAAATAAACCTGCACCGCTTTACCTCTATAGCAGGCCTCCCAGAAGCAAAAACACGCTAAAGCAAGCTGGGTCGTCTGCTTTTAGCTGCATCTGGACTCTTCAGCCCATCGAGTAACATGCTGCTCCGTCAACCCAGTCCGAAAGTTCCTCAGGGACCCAGTTGAATCCATCTCCACCCCTTTTCTGAGTGCCTGTTTTCCAAATCTAGAACCACCAAGGCTTTTCATAGCTCACAGTGTATCCACCCAGGTCAGATTAGAAATTGCAAAACAAAACAAACCCTGGAAGTTTGCTTAGAGTTTTTCAAGAACTGTTCCTGAGAGGGACTACAAGGCCGGCTTGTTATCCTAGGGTGCATGAGAATGCCCTGCAGAAAGAGCGAGGGGGATGTTTCTCGTCGTCACTTCCAGCGGCCCAGTGAGACGCTGGCAATGGCAGCCGGCAGGCCATCGTGCCCCAGTCACACAAATACAGAGGAAGGTCAACCTCAAACATTTTCCCATGAGCTTGCTGTGCCATTACACGCAAAAGTCCAAAACTCAGAGCCGCTGCCGTCATTGACGGTCCCTCGAGGGCTCGCGATGGAAAGAAAGAAAGGACGCGCTGCCAGCCTCTCAGACAGCTCTGCATTCCTCACCCTACCAAGATGGCACCCATAGGACTGCTCACTGACCTGAAAATAATTAGAGAGGTGGGGAAGAGCGTGTGATGAGTCCAGAGAGGCAAATCAGCTCCTTTTAAGTAGAAAAAAAAAAATCGCATGTGTAATGTGCATCGGACATAAGCAGTTTCCCACCCCATTTATTCAGACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_13798741_13799037.mRNA True 2308 mRNA 0.42 1 13796884 13799191

Neighbor

gene id symbol gene type direction distance location
CI01000009_13752424_13753460 NA coding upstream 43061 13752424 ~ 13753823 (+)
CI01000009_13696525_13718933 SSFA2 coding upstream 77951 13696525 ~ 13718933 (+)
CI01000009_13549003_13580198 ITGA4 coding upstream 216651 13549003 ~ 13580233 (+)
CI01000009_13394582_13476351 UBE2E3 coding upstream 320077 13392306 ~ 13476807 (+)
CI01000009_13194613_13197758 NA coding upstream 597183 13194437 ~ 13199701 (+)
CI01000009_13811227_13837798 NA coding downstream 11885 13811076 ~ 13838395 (+)
CI01000009_13884165_13939556 NCKAP1 coding downstream 84656 13883847 ~ 13939688 (+)
CI01000009_13942733_13946356 FRZB coding downstream 143330 13942521 ~ 13946405 (+)
CI01000009_14007631_14010487 NA coding downstream 207896 14007087 ~ 14010693 (+)
CI01000009_14033666_14036472 RETSATL coding downstream 234475 14033559 ~ 14036472 (+)
G58301 NA non-coding upstream 48061 13745821 ~ 13748823 (+)
G58307 NA non-coding upstream 150488 13637284 ~ 13646396 (+)
G58252 NA non-coding upstream 211628 13523613 ~ 13585256 (+)
G58205 NA non-coding upstream 410687 13385986 ~ 13386197 (+)
G58168 NA non-coding upstream 413780 13382604 ~ 13383104 (+)
G58310 NA non-coding downstream 34350 13833541 ~ 13835879 (+)
G58389 NA non-coding downstream 176197 13975388 ~ 13978604 (+)
G58388 NA non-coding downstream 197634 13996825 ~ 14004082 (+)
G58384 NA non-coding downstream 212714 14011905 ~ 14018473 (+)
G58421 NA non-coding downstream 251786 14050977 ~ 14051404 (+)
G58028 NA other upstream 653276 13140378 ~ 13143608 (+)
G57701 NA other upstream 773746 13006643 ~ 13023138 (+)
G57691 NA other upstream 878419 12906444 ~ 12918465 (+)
G57682 NA other upstream 904545 12825469 ~ 12892339 (+)
CI01000009_12432736_12435509 NA other upstream 1360867 12432538 ~ 12436017 (+)
G58382 NA other downstream 234368 14039757 ~ 14039901 (+)
G58455 NA other downstream 447504 14246695 ~ 14258526 (+)
G58558 NA other downstream 697745 14496936 ~ 14501514 (+)
G58649 NA other downstream 850533 14649724 ~ 14652022 (+)
G58711 NA other downstream 967468 14766659 ~ 14773773 (+)

Expression


Co-expression Network