G207903


Basic Information

Item Value
gene id G207903
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 25317002 ~ 25352674 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU282177
AGAAAGCTAACGGAAGAGCATCTGTTCCACATCTGCAATCTATGGCCACTGTTGTCCCGTGTGCCTCCTGCTACGCCAGCAGCAGTGTCCAGCCGTGGGGTTTCTTCGGAAGGGGTCCTGGAGGAGGCTACATGTCCCTCCTGAGCTATCCCGGGCAGCGTGGGACCCCAAAGCCCCGCCTGGCCGGCCATGACCCAAACCTGACTCTGCGTCAAATCTGCCACATGCTGCGCGTCATGCGGAAAGTCCGCCGCAGAGAGGCagctgctgccgccgccgctgcaAGGAAGCAGGCCAGTGCCTTGGGCGTCCCCAACTCCCCCACAGAAAAGCGCTGTCTCCCAGCCTGCTTCCGCCGCAGACGCTCCAACAACCTGAAGAGAGTCAGCTAATACAGGCTGTTCTTGCCCAGCCCTACTGAAGCCCACCTGCAGCCCCCCAGTGGACCAGGGCAAGCTTACTTTGTGTTGATTAAAGGACGGAGCTCTGATTCCTGTCACTTGGAGATGTGAGAGTGGAGCAGTGACTGCAAGTTCTTTCATTTCCTTGAGCTGCTTGAGAGTGCGTTTGTCCAACTTCCACAAACCAACTGATGTGATCAGAAGAGAAACACGGATCTCCTACATGCTCATGCTGGAACCTCGTCTGGGTGATGACACATTCATTCAGGACAAGATCAGACCCCTGGCTACAAACTCGGACTGTCGTCTTTACACTCAAACCTCTGAATCAAGTTGGCTGTGTGATCATCAACAAACCGTAGTTTAATGTGGAGGTGACCAAGTCTGAATATCCTGTCTTTATTGGATTTGAATGGAAATGTGTGGATGAGttgaattaaatgtttaaatggatTTCTTATTGCTTCCTTTGGACTTTTTGATCTGTATCATTTTCCAGTTATTTACATGGGTAAATATGAGTGAAATAAGTCATATTCCATAAGGCAGATGGGCCTCATGTGTTTGGTGCATTAATAATGAATTCAGAAATGAGtctgtttgtttactttgtttgaTTTTGGATTTTATGTGCTTGcttatttgtaaaatgtatgtttgtttgttctattttgtgttattttagtgaAGTCTGTAATTCTGTCAGGTCATATATGTGTCCTATATGTGTTTGTTAAGTCTGCAGAATGGAGCCTTTGTTTACTTTTTCCACTTGAAGTGGTGAATTGCACTAATAATCCAGCTGTGAAATTTGTAATTGCCTTctctttaatttgtgttttttttttttttgcaaaatcttGTAAAGTCCAATCAAGTCAGAGTGCCCAGAGTGTTGGGTGCATAAACTAAATCTGTGGAAAGTTCTCatcagaaaaagaaataagacacgcctatttgtttgtttatttatttatgtgattGTTTGTGGTCGTGTGTGGGGCCTGTGGCCCGTTGGTGTGTGTGGGCTGGTGTGTGTTACCATGCTAAACCTGACCCTGTTATGAGCACTGCCCGTTCTCCTCTCACTCTGGACtgggttttttttaatgactaactgaaaaaaagaaaagtcgtGAGTTGGACGTGTTTACTCCTGCATGTCTGTGCTGTAGAGTTTGCGTGGTTTGCTGTGGTTTAATAAAATTGATTTGCTTGAGAAGACTTTGTGGATTTTATGCTGAAACTGGTTCTGAATGCAGACTTGTCTTCTTCCTAATTTATATGTGACCAACATGTTTTTGTaatgc
>TU282178
tccgttgtgttgtgactcacttccgttgtgttgtggttctatttgcagcgcgtttttctatttgcagcgcgtttttctatttgcagcgcgtttttctttttgcagcgcgtttttctatttgctgcgcctgtgttgtaattttgatggatgtgttttgtgcttttgcagcgcttttcaatttgcactgcgctgggctttctcggccaccgtaTATATGTGTCCTATATGTGTTTGTTAAGTCTGCAGAATGGAGCCTTTGTTTACTTTTTCCACTTGAAGTGGTGAATTGCACTAATAATCCAGCTGTGAAATTTGTAATTGCCTTctctttaatttgtgttttttttttttttgcaaaatcttGTAAAGTCCAATCAAGTCAGAGTGCCCAGAGTGTTGGGTGCATAAACTAAATCTGTGGAAAGTTCTCatcagaaaaagaaataagacacgcctatttgtttgtttatttatttatgtgattGTTTGTGGTCGTGTGTGGGGCCTGTGGCCCGTTGGTGTGTGTGGGCTGGTGTGTGTTACCATGCTAAACCTGACCCTGTTATGAGCACTGCCCGTTCTCCTCTCACTCTGGACtgggttttttttaatgactaactgaaaaaaagaaaagtcgtGAGTTGGACGTGTTTACTCCTGCATGTCTGTGCTGTAGAGTTTGCGTGGTTTGCTGTGGTTTAATAAAATTGATTTGCTTGAGAAGACTTTGTGGATTTTATGCTGAAACTGGTTCTGAATGCAGACTTGTCTTCTTCCTAATTTATATGTGACCAACATGTTTTTGTaatgc

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU282177 True 1711 TUCP 0.45 3 25317002 25321625
TU282178 False 811 lncRNA 0.40 2 25317002 25352674

Neighbor

gene id symbol gene type direction distance location
ccdc113 NA coding downstream 39242 25270141 ~ 25277760 (-)
drc7 NA coding downstream 85991 25212565 ~ 25231011 (-)
c24h11orf49 cunh11orf49,c8h11orf49,zgc:92873,LOC107707434 coding downstream 166013 25143991 ~ 25150989 (-)
LOC103042358 chst1,LOC108428115,LOC107714082,LOC107572125,LOC107654173,LOC107707501,LOC107674940 coding downstream 406229 24904570 ~ 24910773 (-)
LOC103044011 NA coding downstream 486039 24813330 ~ 24830963 (-)
LOC103040081 snrkb,LOC108413384,LOC108268812,LOC107674965,LOC107589179,LOC107571964,LOC107714071 coding upstream 59512 25412186 ~ 25452091 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding upstream 143627 25496301 ~ 25572271 (-)
LOC103040521 NA coding upstream 328556 25681230 ~ 25685611 (-)
LOC111195867 NA coding upstream 739496 26092170 ~ 26095191 (-)
LOC111195834 NA coding upstream 744131 26096805 ~ 26099827 (-)
G207886 csnk2a2,csnk2a2b,LOC106573643 non-coding downstream 17310 25279365 ~ 25299692 (-)
G207874 ckap5,LOC108269026 non-coding downstream 123329 25191237 ~ 25193673 (-)
G207881 ckap5,LOC108269026 non-coding downstream 150324 25153628 ~ 25166678 (-)
G207781 NA non-coding downstream 271385 24962572 ~ 25045617 (-)
G207768 NA non-coding downstream 370474 24897302 ~ 24946528 (-)
G207926 NA non-coding upstream 77330 25430004 ~ 25430323 (-)
G207928 NA non-coding upstream 85375 25438049 ~ 25442155 (-)
G207934 NA non-coding upstream 111867 25464541 ~ 25467095 (-)
G207938 NA non-coding upstream 201573 25554247 ~ 25557367 (-)
G207924 gins3,LOC107707437,LOC107714024,LOC107573213,LOC107589181 non-coding upstream 223394 25576068 ~ 25582312 (-)
usb1 NA other downstream 56835 25251235 ~ 25260167 (-)
G207772 NA other downstream 368151 24948131 ~ 24948851 (-)
G207707 polr2c other downstream 787935 24524734 ~ 24529067 (-)
dnajc24 dnajc24 other downstream 1296688 23938925 ~ 24020314 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other downstream 1904048 23220469 ~ 23412954 (-)
G207940 NA other upstream 239957 25592631 ~ 25733304 (-)
LOC111195756 NA other upstream 566546 25919220 ~ 25938032 (-)
LOC111195825 NA other upstream 636764 25989438 ~ 25992494 (-)
LOC111195762 NA other upstream 727090 26079764 ~ 26086504 (-)
LOC111195761 NA other upstream 733977 26086651 ~ 26088415 (-)

Expression


Co-expression Network