G207928


Basic Information

Item Value
gene id G207928
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 25438049 ~ 25442155 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU282206
tgtaatttctaacTTTTAATTGttagagttctctgtgtttctgtgtccttttctttatttttatgttattatgaGTATAATGTGTAATACGTGTGAAGTGCTGTTTGTTGTACACTgtttgtacactggattttgtaCCATTTCCggttattgactggacctgaagagcttttttttatttcaaatttttatccTGTTATATCCCCGATTTACAAGGTCAATGGCCcaaaccactcattaggacttctcCTATTACCAGTGATGCCCCAAcgccaggagggtgaagactaacacatgcctcctctgatacatgggaagtcagccaccgcctcttttcaaactgctgctgatttggcattgcagagtagcatcacagcgcactcggaggaaagcgcagcgactcggtttccgATACATGAGCTCACAGACTGAGCAAAATCACCCTGGGAGTGACGAGGGGAGAGaggccatctacccacccagagagagcaacgttaattgtgctctctcagggctctggcagctgatggcatcAAGAGATGTCTCTCTTTTAATTCCTATGTCTATGTGGTCTCTCTTGTagctaaatacaatcaaattatCCTAACAGCAAATATCAAACACCTGTTGTAAAGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282206 True 639 lncRNA 0.43 2 25438049 25442155

Neighbor

gene id symbol gene type direction distance location
ccdc113 NA coding downstream 160289 25270141 ~ 25277760 (-)
drc7 NA coding downstream 207038 25212565 ~ 25231011 (-)
c24h11orf49 cunh11orf49,c8h11orf49,zgc:92873,LOC107707434 coding downstream 287060 25143991 ~ 25150989 (-)
LOC103042358 chst1,LOC108428115,LOC107714082,LOC107572125,LOC107654173,LOC107707501,LOC107674940 coding downstream 527276 24904570 ~ 24910773 (-)
LOC103044011 NA coding downstream 607086 24813330 ~ 24830963 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding upstream 54146 25496301 ~ 25572271 (-)
LOC103040521 NA coding upstream 239075 25681230 ~ 25685611 (-)
LOC111195867 NA coding upstream 650015 26092170 ~ 26095191 (-)
LOC111195834 NA coding upstream 654650 26096805 ~ 26099827 (-)
LOC111195836 NA coding upstream 802093 26244248 ~ 26246421 (-)
G207926 NA non-coding downstream 7726 25430004 ~ 25430323 (-)
G207886 csnk2a2,csnk2a2b,LOC106573643 non-coding downstream 138357 25279365 ~ 25299692 (-)
G207874 ckap5,LOC108269026 non-coding downstream 244376 25191237 ~ 25193673 (-)
G207881 ckap5,LOC108269026 non-coding downstream 271371 25153628 ~ 25166678 (-)
G207781 NA non-coding downstream 392432 24962572 ~ 25045617 (-)
G207934 NA non-coding upstream 22386 25464541 ~ 25467095 (-)
G207938 NA non-coding upstream 112092 25554247 ~ 25557367 (-)
G207924 gins3,LOC107707437,LOC107714024,LOC107573213,LOC107589181 non-coding upstream 133913 25576068 ~ 25582312 (-)
LOC111195755 NA non-coding upstream 410750 25852905 ~ 25855561 (-)
G207964 NA non-coding upstream 450985 25893140 ~ 25894477 (-)
G207903 NA other downstream 85375 25317002 ~ 25352674 (-)
usb1 NA other downstream 177882 25251235 ~ 25260167 (-)
G207772 NA other downstream 489198 24948131 ~ 24948851 (-)
G207707 polr2c other downstream 908982 24524734 ~ 24529067 (-)
dnajc24 dnajc24 other downstream 1417735 23938925 ~ 24020314 (-)
G207940 NA other upstream 150476 25592631 ~ 25733304 (-)
LOC111195756 NA other upstream 477065 25919220 ~ 25938032 (-)
LOC111195825 NA other upstream 547283 25989438 ~ 25992494 (-)
LOC111195762 NA other upstream 637609 26079764 ~ 26086504 (-)
LOC111195761 NA other upstream 644496 26086651 ~ 26088415 (-)

Expression


Co-expression Network