CI01000009_13811227_13837798


Basic Information

Item Value
gene id CI01000009_13811227_13837798
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13811076 ~ 13838395 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_13811227_13837798.mRNA
CCATTTAAGAGCACGAGTCCAAGGATTGTGTGAGCAGAGGCTTCAGTCAGACTGTCCCCAGCTGCTCCTCACATTGCCGTGTGCACTCTGCCCGATCCAGCCTCCCTCTCTTCTTTCTTTCTTCCTCACTGACGGCCCAGTGCAAAAGGCCATGGAGGCCACATCACAGAAAACGCTCAGGCAAACACCAAACGTTAAACTTAGAGAGAGCCAGCCACTCTCCCTTCCAGAAAAGCTGTCGAGCACGCAAATTAACATTGGCGGACAGGGTCTGGTCAAAAAAGGGGCTGGACCCATGTCAGGAAACAGTAATTATATCACAATCTGGCTTGTGTTTAGTGTGATGTGTGGACAAAGTTATGCGATGCAGAGCGAGGGAGCCCTTCTCTCTCCATGCCGTGATCTAATCAAAGTCAGGTGGCCTTATTTAGACAGTCAACAACAAAAGAAAGAGGACCAACACAATGCCGCCTCTTACATGAACAACCTATGCACAGCTCTTCACACTTTTATATTCACTCAACACCCTTATGGACTGTGCTGCTCTAATGTAAAGGTCAGTGCAAAGTATCCATGGTTTGAGCGAATGCACGAGCGTGTGGAGTGTTCTAAGATGCAGAGGGATATGCAGGTATGCGATTCAACACGTGTAGCGCAGTGCTCCGAGTCTTCAAAGCATCTCCGACAGTTCGAGCAGCACACGTCTCCCAGAGGGTCCTGCTCGCAGCTCCAGAGTGCATCAGCCCGTTGGATGCAAATACACAAACACTCACACGCCTTCACTACCACACTGGAAAGAAACGGGCACCTGTGTGCGTCGCAAGTGTCGCTCCTCAAATGGAATCCGTTGGCTGGAAACGGATCAGCGATTTCCCCCTCCTCTTCCACAGCCGTAGAAACGCAGAGGGAGAAGGAGAGAGAATTGTTTCCTCACATCCTCGCCAGCATCATTATCCTGCCCACCGGGGGCCGAGATTCCCCAGCTTCTCCGAGACATCGTTCTTCAGAAGAAGCCATCGTGAAGCCGGCTGCTCGAGTCGTATTTTACCGAGACTTTCCTTCTGTTGGCCAGCTGAATGATAAGCTCCCCCGGCGGCATCTCCCGGTCCCGAGTTGGCGTTTTAATGAAATTAACCTGTGCACTATAGCATCCCGCGCTCGTCTCGCGCACGGCAGCCTAGTTTCAACACGCTCTAATCCTCTCATTCCAGCGCAGCTGCAAGAAGCAGCGTGCTGATAAAAATTTCATGATTGTTTGTGAAATATAAGGGGTTATTAGGAAGGCATATACTCAGAGAGACCATGAAGGGTTTCTTCAGAGAACCAAATCAGCAAACATGCTCCAGTCCGAGACAAGAGCACTTTGTCTAATATAGCAGCACCCCTATATCTCGTTTCTGTAAATAAGAATGGAATGAGGATTGTGGGATTTTTTTTATTTTTTTTTTTGGGGGGGTGCTGTTGCAGCCAAGCATGGCTGATTTTCATTCATTAGGGGGAAGGGCACATCATCTCCTGCCTACGGAGCATCCGCGGCATGAATAGGCTGAATCTTAATGATCACTTCTTCTGGGTTACCGGTCTATTGGATTACACTCTACAATGTAAAACAGCTTAATCACTGCTGCATTAGCATAGGAACAAAACTAATTTCTCATTAGTTCATTTCATCACATAGGAATTGCCTGAAATGAGTATATTCTGAGATTATTTCTGGGTTCTGATATTACATTATCGTGTTGGTTGACAGTCGGGAGGGTTGATTTAGCCATTTGTTTCATATAAAACAGTTCTGATAAATAGAAATGCATAAATTGGGACAATGTGTGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_13811227_13837798.mRNA True 1834 mRNA 0.47 6 13811076 13838395

Neighbor

gene id symbol gene type direction distance location
CI01000009_13798741_13799037 NA coding upstream 11885 13796884 ~ 13799191 (+)
CI01000009_13752424_13753460 NA coding upstream 57253 13752424 ~ 13753823 (+)
CI01000009_13696525_13718933 SSFA2 coding upstream 92143 13696525 ~ 13718933 (+)
CI01000009_13549003_13580198 ITGA4 coding upstream 230843 13549003 ~ 13580233 (+)
CI01000009_13394582_13476351 UBE2E3 coding upstream 334269 13392306 ~ 13476807 (+)
CI01000009_13884165_13939556 NCKAP1 coding downstream 45452 13883847 ~ 13939688 (+)
CI01000009_13942733_13946356 FRZB coding downstream 104126 13942521 ~ 13946405 (+)
CI01000009_14007631_14010487 NA coding downstream 168692 14007087 ~ 14010693 (+)
CI01000009_14033666_14036472 RETSATL coding downstream 195271 14033559 ~ 14036472 (+)
CI01000009_14039505_14043545 RETSATL coding downstream 200814 14039209 ~ 14043609 (+)
G58301 NA non-coding upstream 62253 13745821 ~ 13748823 (+)
G58307 NA non-coding upstream 164680 13637284 ~ 13646396 (+)
G58252 NA non-coding upstream 225820 13523613 ~ 13585256 (+)
G58205 NA non-coding upstream 424879 13385986 ~ 13386197 (+)
G58168 NA non-coding upstream 427972 13382604 ~ 13383104 (+)
G58389 NA non-coding downstream 136993 13975388 ~ 13978604 (+)
G58388 NA non-coding downstream 158430 13996825 ~ 14004082 (+)
G58384 NA non-coding downstream 173510 14011905 ~ 14018473 (+)
G58421 NA non-coding downstream 212582 14050977 ~ 14051404 (+)
G58467 NA non-coding downstream 259096 14097491 ~ 14097703 (+)
G58028 NA other upstream 667468 13140378 ~ 13143608 (+)
G57701 NA other upstream 787938 13006643 ~ 13023138 (+)
G57691 NA other upstream 892611 12906444 ~ 12918465 (+)
G57682 NA other upstream 918737 12825469 ~ 12892339 (+)
CI01000009_12432736_12435509 NA other upstream 1375059 12432538 ~ 12436017 (+)
G58382 NA other downstream 195164 14039757 ~ 14039901 (+)
G58455 NA other downstream 408300 14246695 ~ 14258526 (+)
G58558 NA other downstream 658541 14496936 ~ 14501514 (+)
G58649 NA other downstream 811329 14649724 ~ 14652022 (+)
G58711 NA other downstream 928264 14766659 ~ 14773773 (+)

Expression


Co-expression Network