G208011


Basic Information

Item Value
gene id G208011
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 26014747 ~ 26015003 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU282331
caagagccacggtatccagggtaatgtcagcataccaccaagaaggacgaaccacatccaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaacataaaaccacggctgatcaaatcacggcagaattcaatgttcacctcaactctcctgtttccaccagaactgtccgtcaccacaataaattattgtgctctaaaaccaggtgtttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282331 True 257 lncRNA 0.46 1 26014747 26015003

Neighbor

gene id symbol gene type direction distance location
LOC103040521 NA coding downstream 329136 25681230 ~ 25685611 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding downstream 442476 25496301 ~ 25572271 (-)
LOC103040081 snrkb,LOC108413384,LOC108268812,LOC107674965,LOC107589179,LOC107571964,LOC107714071 coding downstream 562656 25412186 ~ 25452091 (-)
ccdc113 NA coding downstream 736987 25270141 ~ 25277760 (-)
drc7 NA coding downstream 783736 25212565 ~ 25231011 (-)
LOC111195867 NA coding upstream 77167 26092170 ~ 26095191 (-)
LOC111195834 NA coding upstream 81802 26096805 ~ 26099827 (-)
LOC111195836 NA coding upstream 229245 26244248 ~ 26246421 (-)
LOC103031232 arntl1a,LOC108439331,LOC107707455,LOC107753525,LOC107665721,LOC108269000 coding upstream 598859 26613862 ~ 26640223 (-)
cep290 cep290 coding upstream 658603 26673606 ~ 26715253 (-)
G208008 NA non-coding downstream 1131 26007220 ~ 26013616 (-)
G207965 NA non-coding downstream 97187 25903907 ~ 25917560 (-)
G207964 NA non-coding downstream 120270 25893140 ~ 25894477 (-)
LOC111195755 NA non-coding downstream 159186 25852905 ~ 25855561 (-)
G207924 gins3,LOC107707437,LOC107714024,LOC107573213,LOC107589181 non-coding downstream 432435 25576068 ~ 25582312 (-)
G208015 sept15,LOC108428130,LOC107707522,LOC107701486,LOC107654154 non-coding upstream 46308 26061311 ~ 26076646 (-)
G208022 NA non-coding upstream 76808 26091811 ~ 26099823 (-)
G208026 uba2,LOC107701803 non-coding upstream 106474 26121477 ~ 26122367 (-)
G208027 uba2 non-coding upstream 108344 26123347 ~ 26124768 (-)
G208030 NA non-coding upstream 112104 26127107 ~ 26157046 (-)
LOC111195825 NA other downstream 22253 25989438 ~ 25992494 (-)
LOC111195756 NA other downstream 76715 25919220 ~ 25938032 (-)
G207940 NA other downstream 281443 25592631 ~ 25733304 (-)
G207903 NA other downstream 662073 25317002 ~ 25352674 (-)
usb1 NA other downstream 754580 25251235 ~ 25260167 (-)
LOC111195762 NA other upstream 64761 26079764 ~ 26086504 (-)
LOC111195761 NA other upstream 71648 26086651 ~ 26088415 (-)
LOC111195835 NA other upstream 88484 26103487 ~ 26117632 (-)
G208046 NA other upstream 197055 26212058 ~ 26212841 (-)
G208394 borcs5,LOC107753635 other upstream 640440 26655443 ~ 26656184 (-)

Expression


Co-expression Network