G208042


Basic Information

Item Value
gene id G208042
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 26163915 ~ 26169806 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU282381
cttcattcttaaacacacacaacagattAACAAAATTTTTTTACACCTCGCTTTTTCTATctctatttatttctctctctctctctctctctctctctctctctctctctctctctctctctctctatttctctctctctccatctctgcaGCTGAGCTCCGTCTGCAGGTGCACGCTGTCCCCGCCACCACATGCGCGCGCGCGGGCTACTGATAAAGCTAGCATCCCAGAGGGCTGTGCGAGAAGCACGCGCCTTACAACAAGGAAGGTCTACTTCGAGTCTGGTTCAACATAGGTAAAGGGTCGGCGGATGCTGGGCAGACACCTGCCCCCAGCTCGCAGAGATATTGGCTccaaattaaagaaaacagcTCAGATCCACCTGCTGAGGCTCCTCATCCTGAGAATGGGATGCGTCTGTGGAGATCTGTTTTCCAGGAAACACTCCTGAATCTGCAGGGGGGAATACTTTCTGCTTATGCTgtatgtatgcgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282381 True 499 lncRNA 0.50 2 26163915 26169806

Neighbor

gene id symbol gene type direction distance location
LOC111195834 NA coding downstream 64088 26096805 ~ 26099827 (-)
LOC111195867 NA coding downstream 68724 26092170 ~ 26095191 (-)
LOC103040521 NA coding downstream 478304 25681230 ~ 25685611 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding downstream 591644 25496301 ~ 25572271 (-)
LOC103040081 snrkb,LOC108413384,LOC108268812,LOC107674965,LOC107589179,LOC107571964,LOC107714071 coding downstream 711824 25412186 ~ 25452091 (-)
LOC111195836 NA coding upstream 74442 26244248 ~ 26246421 (-)
LOC103031232 arntl1a,LOC108439331,LOC107707455,LOC107753525,LOC107665721,LOC108269000 coding upstream 444056 26613862 ~ 26640223 (-)
cep290 cep290 coding upstream 503800 26673606 ~ 26715253 (-)
kitlg NA coding upstream 622956 26792762 ~ 26815459 (-)
LOC111195856 NA coding upstream 776488 26946294 ~ 26949370 (-)
G208030 NA non-coding downstream 6869 26127107 ~ 26157046 (-)
G208029 ca5a,LOC107583128,LOC108268921,LOC107701525,LOC107654151,LOC107581837 non-coding downstream 8647 26134586 ~ 26155268 (-)
G208027 uba2 non-coding downstream 39147 26123347 ~ 26124768 (-)
G208026 uba2,LOC107701803 non-coding downstream 41548 26121477 ~ 26122367 (-)
G208022 NA non-coding downstream 64092 26091811 ~ 26099823 (-)
G208047 NA non-coding upstream 45093 26214899 ~ 26215110 (-)
G208048 NA non-coding upstream 45647 26215453 ~ 26215729 (-)
G208070 NA non-coding upstream 110641 26280447 ~ 26281036 (-)
G208307 NA non-coding upstream 192280 26362086 ~ 26362363 (-)
G208329 NA non-coding upstream 247915 26417721 ~ 26418448 (-)
LOC111195835 NA other downstream 46283 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 75500 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 77411 26079764 ~ 26086504 (-)
LOC111195825 NA other downstream 171421 25989438 ~ 25992494 (-)
LOC111195756 NA other downstream 225883 25919220 ~ 25938032 (-)
G208046 NA other upstream 42252 26212058 ~ 26212841 (-)
G208394 borcs5,LOC107753635 other upstream 485637 26655443 ~ 26656184 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 2046589 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 2492377 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 2613277 28783083 ~ 28860774 (-)

Expression


Co-expression Network