G208048


Basic Information

Item Value
gene id G208048
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 26215453 ~ 26215729 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU282388
CAAGTGTTAGAATAACAATGCTCCTGCTCACGCACTGTGGCTTTATCTTGTCTGAAGCTTTGGGATGAACTGAACACGGGATCagactgagctgctggtttgtGCTGTTTTCATACAGTTTGTCACAGCAGTAGCGAGCATTGTATTATATAATTTGTGTTTAGGGAGTGCGAGAGTTATTGAGTGCGAGTATGAGCGTTATGAATTGCGAGCGTTATGCAGTGTGAGGgttatggagtgcgagtgttatggagtgcgagcgttatggagtgcgagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282388 True 277 lncRNA 0.45 1 26215453 26215729

Neighbor

gene id symbol gene type direction distance location
LOC111195834 NA coding downstream 115626 26096805 ~ 26099827 (-)
LOC111195867 NA coding downstream 120262 26092170 ~ 26095191 (-)
LOC103040521 NA coding downstream 529842 25681230 ~ 25685611 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding downstream 643182 25496301 ~ 25572271 (-)
LOC103040081 snrkb,LOC108413384,LOC108268812,LOC107674965,LOC107589179,LOC107571964,LOC107714071 coding downstream 763362 25412186 ~ 25452091 (-)
LOC111195836 NA coding upstream 28519 26244248 ~ 26246421 (-)
LOC103031232 arntl1a,LOC108439331,LOC107707455,LOC107753525,LOC107665721,LOC108269000 coding upstream 398133 26613862 ~ 26640223 (-)
cep290 cep290 coding upstream 457877 26673606 ~ 26715253 (-)
kitlg NA coding upstream 577033 26792762 ~ 26815459 (-)
LOC111195856 NA coding upstream 730565 26946294 ~ 26949370 (-)
G208047 NA non-coding downstream 343 26214899 ~ 26215110 (-)
G208042 NA non-coding downstream 45647 26163915 ~ 26169806 (-)
G208030 NA non-coding downstream 58407 26127107 ~ 26157046 (-)
G208029 ca5a,LOC107583128,LOC108268921,LOC107701525,LOC107654151,LOC107581837 non-coding downstream 60185 26134586 ~ 26155268 (-)
G208027 uba2 non-coding downstream 90685 26123347 ~ 26124768 (-)
G208070 NA non-coding upstream 64718 26280447 ~ 26281036 (-)
G208307 NA non-coding upstream 146357 26362086 ~ 26362363 (-)
G208329 NA non-coding upstream 201992 26417721 ~ 26418448 (-)
G208344 NA non-coding upstream 255494 26471223 ~ 26471582 (-)
G208356 pigy non-coding upstream 293521 26509250 ~ 26514290 (-)
G208046 NA other downstream 2612 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 97821 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 127038 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 128949 26079764 ~ 26086504 (-)
LOC111195825 NA other downstream 222959 25989438 ~ 25992494 (-)
G208394 borcs5,LOC107753635 other upstream 439714 26655443 ~ 26656184 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 2000666 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 2446454 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 2567354 28783083 ~ 28860774 (-)
G209090 NA other upstream 3808232 30023961 ~ 30024550 (-)

Expression


Co-expression Network