G208390


Basic Information

Item Value
gene id G208390
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 26645672 ~ 26645939 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU282797
ttttaataacagctcttgggtgtaaactggatcgtgagatcacaatttcgttccacctcatgtaccacatgtgatgcaaatgacaaaatttccttgaatccttgaatcctagGAAAAAAGTTccacagagctggaggaggaagagaaggaggggAAGTAAGGGAAGGAAtgtggaagaagaagaggatgaGAAGTAGCATTAAGACAAGGAGGAAGTAGGATGAGGAGGgatgagaaagagaaggaacaAGAAGGATTAGCAGGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282797 True 268 lncRNA 0.43 1 26645672 26645939

Neighbor

gene id symbol gene type direction distance location
LOC103031232 arntl1a,LOC108439331,LOC107707455,LOC107753525,LOC107665721,LOC108269000 coding downstream 5449 26613862 ~ 26640223 (-)
LOC111195836 NA coding downstream 399251 26244248 ~ 26246421 (-)
LOC111195834 NA coding downstream 545845 26096805 ~ 26099827 (-)
LOC111195867 NA coding downstream 550481 26092170 ~ 26095191 (-)
LOC103040521 NA coding downstream 960061 25681230 ~ 25685611 (-)
cep290 cep290 coding upstream 27667 26673606 ~ 26715253 (-)
kitlg NA coding upstream 146823 26792762 ~ 26815459 (-)
LOC111195856 NA coding upstream 300355 26946294 ~ 26949370 (-)
LOC111195857 NA coding upstream 305750 26951689 ~ 26953473 (-)
LOC103031696 ano1,LOC105911290,LOC106573096 coding upstream 380555 27026494 ~ 27233590 (-)
G208386 NA non-coding downstream 10132 26632153 ~ 26635540 (-)
G208357 LOC108439330,LOC107665709,LOC105895626,LOC107753524 non-coding downstream 57282 26586222 ~ 26588390 (-)
G208356 pigy non-coding downstream 131382 26509250 ~ 26514290 (-)
G208344 NA non-coding downstream 174090 26471223 ~ 26471582 (-)
G208329 NA non-coding downstream 227224 26417721 ~ 26418448 (-)
G208392 NA non-coding upstream 2538 26648477 ~ 26648687 (-)
G208395 NA non-coding upstream 10550 26656489 ~ 26657416 (-)
G208417 NA non-coding upstream 143701 26789640 ~ 27220851 (-)
G208438 NA non-coding upstream 194350 26840289 ~ 26871460 (-)
G208445 NA non-coding upstream 213472 26859411 ~ 26863216 (-)
G208046 NA other downstream 432831 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 528040 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 557257 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 559168 26079764 ~ 26086504 (-)
LOC111195825 NA other downstream 653178 25989438 ~ 25992494 (-)
G208394 borcs5,LOC107753635 other upstream 9504 26655443 ~ 26656184 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 1570456 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 2016244 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 2137144 28783083 ~ 28860774 (-)
G209090 NA other upstream 3378022 30023961 ~ 30024550 (-)

Expression


Co-expression Network