CI01000009_13983271_13988001


Basic Information

Item Value
gene id CI01000009_13983271_13988001
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 13983208 ~ 13988348 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_13983271_13988001.mRNA
AGCAAATCAATTTTGTGAGTATCATACAGCCTCCAAAGTGCAAACGAGATGAGAGGTCATGCTGAATGCTATAGGATTAGAACCTTCATCTGCCATTGGATGTCCCATAACCACCTGATCTATGTAAACAATGATACTGTGAAATGTATAGATTACAAAGGTCAGGTTTTACAGGTGTTACAGGTGTTTGAGCACTATATAAAGGAAACTCCTTTAGATCATCGTTCGCTACACTCGTATTTGTTATGCGCTACTTATTGCTGAGCAAGAGTTGTTTTTTGTTCTTACAGCTACATTTATACATTTTCTGCTTTTCTCTTTCTAAACAGCTCAACTAAGCAGCGAGAATGAGCACTTCTTCGGGACAAGAAAATGGCAAAGTTGTAGTGATAGGTTCAGGTTTTGCAGGTTTGGCTGCTGCAGCCAGGTTGGTGGAGGCAGGATTTGAAAATGTCTTGGTACTTGAGGCAAAGGAGAGGGTTGGAGGTCGAGTTCACACCACTAAACCGTTCACTGAGAATGTAATTGAAGTTGGAGCTAACTGGATTCACGGGCAGAAAGGAAACCCCCTGTTCAAGATTGCTAAAGAGAAGAACCTGCTATCCGAGGGACCGTCTGCACGCAAAAAAACCCGTTCTGTAACCACTGAAGATTATTTTTTCAAAGAAGATGGGAAGCAGGTCTCCACAAAAGTTGTAGATAAGGTGACTTCGTATTTCAGCAAGCTCACCGACAAAGCTTTTGATGATGAACTCAAGAGCAGGCACAGAAAACTAACTCTAGGTGCTTATCTGGACGATGCCTTTGGATCCACCTACCATTTTTTATATTTTGCTCATCCGAATGCACCCATAGTTTTGTTTGTGAGTACCAGATGCTCCCCTGGACGATATTTTTTCTGATTATATATAGCATATATATATTTCTCTCTCTCTCTCTCTCTTTCTCACACACATGCACATAAA

Function

NR:

description
Spermine oxidase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_13983271_13988001.mRNA True 965 mRNA 0.41 2 13983208 13988348

Neighbor

gene id symbol gene type direction distance location
CI01000009_13975122_13976026 NA coding downstream 6084 13975099 ~ 13978614 (-)
CI01000009_13963789_13974296 DNAJC10 coding downstream 8912 13962949 ~ 13974296 (-)
CI01000009_13946619_13952884 NA coding downstream 29487 13946499 ~ 13953721 (-)
CI01000009_13878935_13880850 DUSP19A, DUSP19 coding downstream 102358 13876342 ~ 13880850 (-)
CI01000009_13761020_13794137 PDE1A coding downstream 189020 13760110 ~ 13794188 (-)
CI01000009_13990326_14004387 VIL1 coding upstream 1384 13989732 ~ 14004826 (-)
CI01000009_14012800_14024940 ITGB2 coding upstream 23602 14011950 ~ 14025231 (-)
CI01000009_14052206_14053489 NA coding upstream 63621 14051969 ~ 14053953 (-)
CI01000009_14201347_14205288 NA coding upstream 212767 14201115 ~ 14205887 (-)
CI01000009_14248805_14255014 NA coding upstream 259295 14247643 ~ 14255775 (-)
G59488 NA non-coding downstream 42580 13939445 ~ 13940628 (-)
G59489 NA non-coding downstream 51527 13883972 ~ 13931681 (-)
G59470 NA non-coding downstream 118605 13826486 ~ 13864603 (-)
G59472 NA non-coding downstream 163212 13799998 ~ 13819996 (-)
G59473 NA non-coding downstream 195795 13700592 ~ 13787413 (-)
G59491 NA non-coding upstream 50976 14039324 ~ 14039893 (-)
G59552 NA non-coding upstream 87276 14075624 ~ 14075833 (-)
G59602 NA non-coding upstream 176544 14164892 ~ 14214853 (-)
G59610 NA non-coding upstream 187655 14176003 ~ 14176444 (-)
G59626 NA non-coding upstream 200037 14188385 ~ 14189163 (-)
G59097 NA other downstream 1693690 12288217 ~ 12289518 (-)
CI01000009_08858198_08860555 NA other downstream 5122645 8856310 ~ 8860563 (-)
G55814 NA other downstream 5555196 8425821 ~ 8428012 (-)
G53515 NA other downstream 8477960 5502395 ~ 5505248 (-)
G59490 NA other upstream 45216 14033564 ~ 14037873 (-)
G59811 NA other upstream 874049 14862397 ~ 14887464 (-)
G59941 NA other upstream 1143756 15132104 ~ 15132503 (-)
CI01000009_15318811_15390382 TNS1 other upstream 1387912 15318811 ~ 15390382 (-)
CI01000009_15654061_15662554 ARPC2 other upstream 1658427 15653760 ~ 15663026 (-)

Expression


Co-expression Network