G208455


Basic Information

Item Value
gene id G208455
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 26885476 ~ 26894050 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU282886
tattggttaatcttttatataaatgcgtgtaaaatacactgtgagtaataaaaatgatcaaatacaatgtgagtattggttatgcatatagaatacaaggtttcacacaatgattatgtaattatagatactaagttaagtaatcataattgaaagatatttgtcaataaacCCAacgtataataaacagttactctttaaTTCCCGCTTTTGACGTATCAACCAGATACGTCAACACATCGTAATTCCtccaaatatgtatatttacatatGTTCAACACTTGATCAACATGTGAGTGAACATTTTGCTAACGGTGGGAGCGAAAACCTGTTCCGGCAGCCTTCCAACCAATTTATGACAGGAAAAATTCTCCCACAGCCCCTCTGCCGCCAGGCGGCTAATAATTCGAACTCTATCAAaggaggaagtgacatcattgcCTTAAAGTCATCCCCAAGACTGGTTGGTTTACAGCATTTCCTCctgctcttcctcacactccagTATAGGTAAAATACATGGTGGTTTACAGTCTTTATTATCATATACCCATTAGAGTAATGGTTATTATTACCTGGAGCCATATTGGAATAACTGGAGGGAGTGCTGGTTCGTTATAGTGTCCGTACTTTTACCTGTTCCACCCCGTTACCGTACCAAGCCATTATTACacaataaatgtgttttccctCTAAGGTTCCCACTATTTAGTAAACTTGTTATCTATAGCCCTATATGTGTAAGTGTTAAGGTtacagagtgtatatatatatattttttttttacaatttcttttttttttttcttttttattcgtTTTGCTAACCAACcccataatccctttattaaattctgtaaattCTCTAATTATCTATCCAGCCACACACCTCTCTGACATTATTCAAca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU282886 True 908 lncRNA 0.35 2 26885476 26894050

Neighbor

gene id symbol gene type direction distance location
kitlg NA coding downstream 70017 26792762 ~ 26815459 (-)
cep290 cep290 coding downstream 170223 26673606 ~ 26715253 (-)
LOC103031232 arntl1a,LOC108439331,LOC107707455,LOC107753525,LOC107665721,LOC108269000 coding downstream 245253 26613862 ~ 26640223 (-)
LOC111195836 NA coding downstream 639055 26244248 ~ 26246421 (-)
LOC111195834 NA coding downstream 785649 26096805 ~ 26099827 (-)
LOC111195856 NA coding upstream 52244 26946294 ~ 26949370 (-)
LOC111195857 NA coding upstream 57639 26951689 ~ 26953473 (-)
LOC103031696 ano1,LOC105911290,LOC106573096 coding upstream 132444 27026494 ~ 27233590 (-)
LOC111195765 NA coding upstream 214249 27108299 ~ 27111038 (-)
LOC111195771 NA coding upstream 251986 27146036 ~ 27152300 (-)
G208446 NA non-coding downstream 4015 26861641 ~ 26881461 (-)
G208438 NA non-coding downstream 14016 26840289 ~ 26871460 (-)
LOC111195767 NA non-coding downstream 15359 26869153 ~ 26870117 (-)
G208447 NA non-coding downstream 17223 26863386 ~ 26868253 (-)
G208445 NA non-coding downstream 22260 26859411 ~ 26863216 (-)
LOC111195769 NA non-coding upstream 56864 26950914 ~ 26951324 (-)
LOC111195768 NA non-coding upstream 60717 26954767 ~ 26956450 (-)
G208481 NA non-coding upstream 97443 26991493 ~ 26991928 (-)
G208487 NA non-coding upstream 114117 27008167 ~ 27011112 (-)
G208518 NA non-coding upstream 271126 27165176 ~ 27181579 (-)
G208394 borcs5,LOC107753635 other downstream 229292 26655443 ~ 26656184 (-)
G208046 NA other downstream 672635 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 767844 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 797061 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 798972 26079764 ~ 26086504 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 1322345 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 1768133 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 1889033 28783083 ~ 28860774 (-)
G209090 NA other upstream 3129911 30023961 ~ 30024550 (-)
G209127 NA other upstream 3268407 30162457 ~ 30162973 (-)

Expression


Co-expression Network