G208520


Basic Information

Item Value
gene id G208520
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 27170753 ~ 27174391 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU283001
ttcaaaccacacataccccacaccacacacactccacaccacacataccccacaccacacacacactccaccccacacataccacacacaattcacaccccacaccacacactccacaccacacataccccacaccacacacactttaaaccacacacacactccacaccacacacaccccacaccacacataccccacactccataccacacacacactccacagctcacataccccacaccatacacactccaccccacacataccacacacagttcacaccacacacaccccacactccacaccaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283001 True 310 lncRNA 0.54 3 27170753 27174391

Neighbor

gene id symbol gene type direction distance location
LOC111195771 NA coding downstream 18453 27146036 ~ 27152300 (-)
LOC111195765 NA coding downstream 59715 27108299 ~ 27111038 (-)
LOC111195857 NA coding downstream 217280 26951689 ~ 26953473 (-)
LOC111195856 NA coding downstream 221383 26946294 ~ 26949370 (-)
kitlg NA coding downstream 355294 26792762 ~ 26815459 (-)
tmem231 tmem231 coding upstream 982376 28156767 ~ 28163353 (-)
adat1 NA coding upstream 1002749 28177140 ~ 28193065 (-)
nup160 nup160,LOC107555692,LOC107756876 coding upstream 1136475 28310866 ~ 28367957 (-)
rpl27a rpl27a,LOC107687759,LOC108439055 coding upstream 1298130 28472521 ~ 28476854 (-)
psma1 psma1,LOC108439057,LOC107748950 coding upstream 1309100 28483491 ~ 28489434 (-)
G208519 NA non-coding downstream 589 27168778 ~ 27170164 (-)
G208487 NA non-coding downstream 159641 27008167 ~ 27011112 (-)
G208481 NA non-coding downstream 178825 26991493 ~ 26991928 (-)
LOC111195768 NA non-coding downstream 214303 26954767 ~ 26956450 (-)
LOC111195769 NA non-coding downstream 219429 26950914 ~ 26951324 (-)
G208527 NA non-coding upstream 32419 27206810 ~ 27207649 (-)
G208529 NA non-coding upstream 33722 27208113 ~ 27210267 (-)
G208542 NA non-coding upstream 90185 27264576 ~ 27264959 (-)
G208551 NA non-coding upstream 960750 28135141 ~ 28135342 (-)
G208640 NA non-coding upstream 1035004 28209395 ~ 28209959 (-)
G208394 borcs5,LOC107753635 other downstream 514569 26655443 ~ 26656184 (-)
G208046 NA other downstream 957912 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 1053121 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 1082338 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 1084249 26079764 ~ 26086504 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 1042004 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 1487792 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 1608692 28783083 ~ 28860774 (-)
G209090 NA other upstream 2849570 30023961 ~ 30024550 (-)
G209127 NA other upstream 2988066 30162457 ~ 30162973 (-)

Expression


Co-expression Network