G208649


Basic Information

Item Value
gene id G208649
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 28290609 ~ 28292211 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU283205
gttttattgtcaatattgCACATGTACAGGATATACAGATAattgaaattacattactctccttcccaaagttacagcaagtacagcaaAATACAACAAGTTTACAGAtatagacatacgtgagacaaaagacacaagacaatattgcaatagtgatggggggattaaagagggaatgactaatattttttatcatataaaatacagtcatgtgaaaaatAGAATTCCCTATAAGAACCtttgtcttttgttttaaaattggaTAACTTTCAAACATATGTCATCCTGAATTTTTCACCTATGTAATGTTTGACGGGTTTCTTGCATGTACTGTCTATTTCAAATAACCCCACTCAATAGGATTAAGAACTGGCCTTTGCCTGcaattcagtttcagttttttaaCAGATGGTCTCAACTTTCTCAAACACCCTCTGGAGAATGTATActacattcaataaaaaaaataatattagagACCTAAGTAATTTCTTCAGTTGTATTTTTCCAAGAATACATGCTCTGGGTCATGCTGGTTGAGTATCTGCCATCTTGTGGCTGCCATCTGCCATCTGATCTGTGGCTGAGCATGTAATTTTTGGCAATCAATGCAGGTGTGTTGAAGCTTCTTGATGGCCTCACGACACCTCAAAACCCAATAATGTTTCCTGATCTATGCCAAGACTCAAGTCCCGACAAATACCTTGTACTGACAGGGATCAGAATGGATTCAGTGGAGGACAGTAGTGGAATCGGACCAGAGAATTACTTGTCGAACAGTGAGTTCTGCAAGAAGCAGCTTGGTTACTTGAGCCCCAGTGAGTGCTGCACTCAGCTCAAGACGAAGCATTGACGCCTGTTTCTTGGGGGCTACTCTTGATCTTGCAAATACAAAGGACATATGCACTTGACCTACCTCCATGGCCCATATATAGGCCACTCATCCTTATGCTTATTCAGAATATATTCAGGTCCCTGCTACATGACTGCTTGTGATAGTGTATAGCACCTGGGAACTGTCAGCTCTTCCAGCTCTGGGAGCTCTTGTTTTTAAGTATTCCACCTAGCCAACAAACCTTGGGGTTCAATAAGATCATCTGTGAGGGACAGCCAAAGCTCACTAGTTTGTGATCTAGCTCCTGTCAAAAGCTGCTGTACTACTTCAGGTCTATTGCTCGCCCACTGGCGGAGCTCAAAGCGTCCCTTAAGCCACAGATGATGAAGACCATCCACAAGAGCTTTGCCGTGGTCTGCTGACTAAAGACTCTGAAGACAATTGTCCACATAGAAGGACTGTTCTAGTGATTTCATCAGGTCTGAATCCACTGTTGTATGGTCTTGGACAAGCCTCTGTGGTGCATATCTACAACAAGGACTGCATGTTGTGCCGAATGGCCAAACTTGCCACTCATAAATCCTAGGTTGTTCCGTTCTTTCCATATTCCTCCACATAAATCTGAGGAGGGGCTTATCAACTGGCAGTAGACTCGGTGGAACATGCCTCTGACATCTCCACTCACAGCCACTGAATACTTACGGAATCGAAAAAGGACTCCAAGTGAGGATGATCCAAGTGTAGGTCCAGGAAGGAGATGCTTATTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283205 True 1603 lncRNA 0.42 1 28290609 28292211

Neighbor

gene id symbol gene type direction distance location
adat1 NA coding downstream 97544 28177140 ~ 28193065 (-)
tmem231 tmem231 coding downstream 127256 28156767 ~ 28163353 (-)
LOC103031696 ano1,LOC105911290,LOC106573096 coding downstream 1057019 27026494 ~ 27233590 (-)
nup160 nup160,LOC107555692,LOC107756876 coding upstream 18655 28310866 ~ 28367957 (-)
rpl27a rpl27a,LOC107687759,LOC108439055 coding upstream 180310 28472521 ~ 28476854 (-)
psma1 psma1,LOC108439057,LOC107748950 coding upstream 191280 28483491 ~ 28489434 (-)
LOC103040620 LOC108443074 coding upstream 310679 28602890 ~ 28622098 (-)
LOC103041235 NA coding upstream 376519 28668730 ~ 28683502 (-)
G208647 NA non-coding downstream 3712 28286532 ~ 28286897 (-)
G208640 NA non-coding downstream 80650 28209395 ~ 28209959 (-)
G208551 NA non-coding downstream 155267 28135141 ~ 28135342 (-)
G208542 NA non-coding downstream 1025650 27264576 ~ 27264959 (-)
G208529 NA non-coding downstream 1080342 27208113 ~ 27210267 (-)
G208662 NA non-coding upstream 64403 28356614 ~ 28357085 (-)
G208665 NA non-coding upstream 80880 28373091 ~ 28381368 (-)
G208683 LOC108439052 non-coding upstream 126424 28418635 ~ 28421081 (-)
G208702 flnc,LOC108439053,LOC108439063 non-coding upstream 169317 28461528 ~ 28463518 (-)
LOC111195846 NA non-coding upstream 199140 28491351 ~ 28492233 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other downstream 22240 28216395 ~ 28268369 (-)
G208394 borcs5,LOC107753635 other downstream 1634425 26655443 ~ 26656184 (-)
G208046 NA other downstream 2077768 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 2172977 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 2202194 26086651 ~ 26088415 (-)
LOC107197304 NA other upstream 369972 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 490872 28783083 ~ 28860774 (-)
G209090 NA other upstream 1731750 30023961 ~ 30024550 (-)
G209127 NA other upstream 1870246 30162457 ~ 30162973 (-)
LOC103038932 ldb2a,LOC108424199,LOC107756465,LOC107694979,LOC107680613,LOC107550874,LOC107741120 other upstream 1909320 30201531 ~ 30318216 (-)

Expression


Co-expression Network