G209127


Basic Information

Item Value
gene id G209127
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 30162457 ~ 30162973 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU283834
tagaaagacagacagacagatagagggagagagagagagaggatggcaGTTATCATGGGTCCTCGCGCTCGGCTGTTGCTTCTTTAATCAGACTaagactttatatattttttttattattgttgcttTATCAGTGATATTATCAGGCCTCCCGTGCAGTGCTCGTGCTTCTCCGGCGCTCGCGATGCTGTGGAGAGCGGCGCTCGCGCTCGGGCTCGTGCTGCTCCTGCTCCCGCACACGGAGCCCCGCGCGCCGCTGGACTTCGGCCTCGTGCCCGGAGGAGTGTATGACACGGTAGCGCATTACGAACCGGGACCCATCGGGCTCCTCTTCAACATGGTGCACGCCTTCCTGCACGTGGTCCAGCCCAACCCTTTCCCTGAAGGTAAGAGCTACCTACCTGGTGCTGGAGGGGGTTCGGACAGGTGCAGCTGCACAcctgtatttata
>TU283837
GTTCGGTTAGAGACGGAGTCGTACGCGCGCACTCACGAGGAGCGCGTGGAGAAGAGGATGCGAGgctagaaagacagacagacagatagagggagagagagagagaggatggcaGTTATCATGGGTCCTCGCGCTCGGCTGTTGCTTCTTTAATCAGACTaagactttatatattttttttattattgttgcttTATCAGTGATATTATCAGGCCTCCCGTGCAGTGCTCGTGCTTCTCCGGCGCTCGCGATGCTGTGGAGAGCGGCGCTCGCGCTCGGGCTCGTGCTGCTCCTGCTCCCGCACACGGAGCCCCGCGCGCCGCTGGACTTCGGCCTCGTGCCCGGAGGAGTGTATGACACGGTAGCGCATTACGAACCGGGACCCATCGGGCTCCTCTTCAACATGGTGCACGCCTTCCTGCACGTGGTCCAGCCCAACCCTTTCCCTGAAGGTAAGAGCTACCTACCTGGTGCTGGAGGGGGTTCGGACAGGTGCAGCTGCACAcctgtatttata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283834 False 451 TUCP 0.56 1 30162457 30162907
TU283837 True 517 TUCP 0.57 1 30162457 30162973

Neighbor

gene id symbol gene type direction distance location
LOC103023888 ntrk3a,LOC105018511,LOC108269325,LOC108438531 coding downstream 52417 30061148 ~ 30110040 (-)
LOC103042757 klhl25,LOC106560960,LOC107581825,LOC107714043 coding downstream 690577 29434479 ~ 29471880 (-)
LOC103039163 sv2bb,LOC108444497,LOC107654137,LOC107583122,LOC107714041,LOC107720517 coding downstream 1004889 29043975 ~ 29157568 (-)
LOC107197240 LOC107197240,LOC108270618,LOC107581863,LOC107714027,LOC107654092,LOC107102881,LOC102226886 coding downstream 1141530 29019220 ~ 29020927 (-)
LOC103034116 NA coding downstream 1273572 28871840 ~ 28888885 (-)
LOC103038627 LOC108424200,LOC107694978,LOC107680612,LOC108269149 coding upstream 5128 30168101 ~ 30195378 (-)
LOC103021866 LOC108424141,LOC107550873,LOC108269199,LOC107694980,LOC107756464,LOC107741111 coding upstream 200320 30363293 ~ 30390245 (-)
LOC103031457 NA coding upstream 1091374 31254347 ~ 31260863 (-)
LOC103031775 NA coding upstream 1101598 31264571 ~ 31266955 (-)
LOC103032100 NA coding upstream 1114204 31277177 ~ 31282581 (-)
G209124 NA non-coding downstream 2127 30159877 ~ 30160330 (-)
G209121 NA non-coding downstream 5944 30155074 ~ 30156513 (-)
G209104 NA non-coding downstream 33796 30128178 ~ 30128661 (-)
G209089 NA non-coding downstream 139736 30022099 ~ 30022721 (-)
G209058 NA non-coding downstream 178153 29522085 ~ 29984304 (-)
LOC111195840 NA non-coding upstream 160589 30323562 ~ 30327730 (-)
G209166 NA non-coding upstream 274345 30437318 ~ 30437788 (-)
G209177 NA non-coding upstream 579453 30742426 ~ 30742669 (-)
G209184 NA non-coding upstream 593333 30756306 ~ 30757507 (-)
G209189 NA non-coding upstream 648743 30811716 ~ 30837740 (-)
G209090 NA other downstream 137907 30023961 ~ 30024550 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other downstream 1301683 28783083 ~ 28860774 (-)
LOC107197304 NA other downstream 1466757 28662183 ~ 28695700 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other downstream 1894088 28216395 ~ 28268369 (-)
G208394 borcs5,LOC107753635 other downstream 3506273 26655443 ~ 26656184 (-)
LOC103038932 ldb2a,LOC108424199,LOC107756465,LOC107694979,LOC107680613,LOC107550874,LOC107741120 other upstream 38558 30201531 ~ 30318216 (-)
fstl5 fstl5,LOC107550871 other upstream 350934 30513907 ~ 30803356 (-)
G209224 NA other upstream 935871 31098844 ~ 31099861 (-)
G209256 NA other upstream 1110895 31273868 ~ 31274402 (-)
G209303 NA other upstream 1354460 31517433 ~ 31517892 (-)

Expression


Co-expression Network