G209177


Basic Information

Item Value
gene id G209177
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 30742426 ~ 30742669 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU283908
cttttttgttttattctataaactacggacaaaatttctcccaaattcctaaaaaatattgtcatttagagcatttatttgcagaaaatcagaaatggctgaaataacaaaaaatatgcagagctttccaacctcaaataatgcaaagaaaacaagttcatattcataaagttttaagagttcagaaatcaatacttggtggaataatcctggtttttaatcacagttttcatgcatcttggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283908 True 244 lncRNA 0.29 1 30742426 30742669

Neighbor

gene id symbol gene type direction distance location
LOC103021866 LOC108424141,LOC107550873,LOC108269199,LOC107694980,LOC107756464,LOC107741111 coding downstream 352181 30363293 ~ 30390245 (-)
LOC103038627 LOC108424200,LOC107694978,LOC107680612,LOC108269149 coding downstream 547048 30168101 ~ 30195378 (-)
LOC103023888 ntrk3a,LOC105018511,LOC108269325,LOC108438531 coding downstream 632386 30061148 ~ 30110040 (-)
LOC103042757 klhl25,LOC106560960,LOC107581825,LOC107714043 coding downstream 1270546 29434479 ~ 29471880 (-)
LOC103039163 sv2bb,LOC108444497,LOC107654137,LOC107583122,LOC107714041,LOC107720517 coding downstream 1584858 29043975 ~ 29157568 (-)
LOC103031457 NA coding upstream 511678 31254347 ~ 31260863 (-)
LOC103031775 NA coding upstream 521902 31264571 ~ 31266955 (-)
LOC103032100 NA coding upstream 534508 31277177 ~ 31282581 (-)
rapgef2 rapgef2 coding upstream 547465 31290134 ~ 31382522 (-)
LOC103044229 LOC103044229,LOC108430909 coding upstream 1333922 32076591 ~ 32116564 (-)
G209166 NA non-coding downstream 304638 30437318 ~ 30437788 (-)
LOC111195840 NA non-coding downstream 414696 30323562 ~ 30327730 (-)
G209124 NA non-coding downstream 582096 30159877 ~ 30160330 (-)
G209121 NA non-coding downstream 585913 30155074 ~ 30156513 (-)
G209104 NA non-coding downstream 613765 30128178 ~ 30128661 (-)
G209184 NA non-coding upstream 13637 30756306 ~ 30757507 (-)
G209189 NA non-coding upstream 69047 30811716 ~ 30837740 (-)
G209208 NA non-coding upstream 277431 31020100 ~ 31020380 (-)
G209236 NA non-coding upstream 473946 31216615 ~ 31217148 (-)
G209254 NA non-coding upstream 529167 31271836 ~ 31272348 (-)
LOC103038932 ldb2a,LOC108424199,LOC107756465,LOC107694979,LOC107680613,LOC107550874,LOC107741120 other downstream 424210 30201531 ~ 30318216 (-)
G209127 NA other downstream 579453 30162457 ~ 30162973 (-)
G209090 NA other downstream 717876 30023961 ~ 30024550 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other downstream 1881652 28783083 ~ 28860774 (-)
LOC107197304 NA other downstream 2046726 28662183 ~ 28695700 (-)
G209224 NA other upstream 356175 31098844 ~ 31099861 (-)
G209256 NA other upstream 531199 31273868 ~ 31274402 (-)
G209303 NA other upstream 774764 31517433 ~ 31517892 (-)
gar1 gar1,LOC106513240,LOC107756508,LOC107680945,LOC107586061 other upstream 1886625 32629294 ~ 32639929 (-)
G209458 NA other upstream 2212946 32955615 ~ 32956085 (-)

Expression


Co-expression Network