CI01000009_14242224_14243004


Basic Information

Item Value
gene id CI01000009_14242224_14243004
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14242117 ~ 14243724 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_14242224_14243004.mRNA
TTATAAATAAACATAGACTGTCTTTGAATGAAATGAAGCTCAGACTTCTGCCTTGTATTATCCTTTTAGGTTTCATGCAAAAATGAATATTTTGGGCTCAGTAAATGATGACTATTATTGTTGAGTCTAGAGCAAAGTTGCTTCTCTCCACAAGGATAGAGATGCCTATGACGTCCTATGAGGTGCACGAAAACTCAACTCCGTTAACCGGACTGACCCTCTCGTTTCCACATTCCCTTTTCATATCCGCTACTCAATGCAATAACTGTCAAATGGCAAACAATAACCCCATACGGATAAAAGTCCGATCAGACTTGTGCAAGATGAGCATGGAGAGTGCCAACACGACACGGGTGACCGAGAGAAAACGCAAGCGTGATTATGGATTGTATTTCGGCATTAGTTGCCAGAGCGGCTGTTGTAGTTTTGAAAATATGATTTATTGCAGGGACTGGTTTGAGCGCAAGTAGTAATTAATGATAAGGATGGAGGTGAGGAAGAGGGCAGGAAGAAGCTGTTTGAAGGCCATGTAGGTAATATCCAGATCGATGCACTATGCTCTGCGGTTATTCTTGTTATGGGAATGCTAAAATGTACTAGGGATGTGCAAAACTGCTTAATTTTGAAAGTTGCTATGTGTTTTTTTTGTTTTTTCTTTCTTTTTCACCTGAACAGCTATGTATGACTTTCTTTAAGGGGCTAAACGATTTGGGGGGAAAAAACTAATTGCAATATTTCTGATAAAAATTGTGAGGTTACTTTATTTTACAGTGCCATGGTTATATTGCAATTACTCAAATAAGTACTGAGTACTATTAATTAACTACATATACTTATACTTAGAGTTACTTGTAATTATTCATAATTTACTATTGTTACTATAGTAAGTGCATGTAGTAACATGTAACTACGGCACTGTAAAATAAAGTGTTATCAATTGTGATTGGCCAAAAAAAAAATTTGGTCACAATTTGGCAAAAAAAAAAAACTTAGTCATTACATGTCATTATGATTATAAATTAATTGTTAAAAATGTGAAACAAAATAATAAATAAATTACTATTTTATATCAGGGGAGCACTTAAAGCTGCTGTTTTTTTGGCAACAGGTTTGTAAACGCTTTTCATGCTGAGATTTTGTAAGTTTGAGGCTTAGTCGACAATTAGGGGACAACGTATATGTTCATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_14242224_14243004.mRNA True 1190 mRNA 0.35 3 14242117 14243724

Neighbor

gene id symbol gene type direction distance location
CI01000009_14170062_14192930 NA coding upstream 48785 14169221 ~ 14193332 (+)
CI01000009_14095330_14128580 NA coding upstream 113535 14093645 ~ 14128582 (+)
CI01000009_14039505_14043545 RETSATL coding upstream 198508 14039209 ~ 14043609 (+)
CI01000009_14033666_14036472 RETSATL coding upstream 205645 14033559 ~ 14036472 (+)
CI01000009_14007631_14010487 NA coding upstream 231424 14007087 ~ 14010693 (+)
CI01000009_14264935_14273006 NA coding downstream 19699 14263423 ~ 14277555 (+)
CI01000009_14296451_14314340 ADARB1A, ADARB1B, ADARB1 coding downstream 52727 14296451 ~ 14314349 (+)
CI01000009_14348389_14374515 TRAF3IP1 coding downstream 104665 14348389 ~ 14375683 (+)
CI01000009_14380226_14386430 ASB1 coding downstream 136502 14380226 ~ 14386866 (+)
CI01000009_14432830_14450364 TWIST1.L, TWIST1, TWIST2, TWIST1B, TWIST1.S coding downstream 188992 14432716 ~ 14451542 (+)
G58452 NA non-coding upstream 40271 14198638 ~ 14201846 (+)
G58489 NA non-coding upstream 85886 14125320 ~ 14156231 (+)
G58467 NA non-coding upstream 144414 14097491 ~ 14097703 (+)
G58421 NA non-coding upstream 190713 14050977 ~ 14051404 (+)
G58384 NA non-coding upstream 223644 14011905 ~ 14018473 (+)
G58456 NA non-coding downstream 61216 14304940 ~ 14399351 (+)
G58447 NA non-coding downstream 150090 14393814 ~ 14402390 (+)
G58454 NA non-coding downstream 158925 14402649 ~ 14403582 (+)
CI01000009_14474300_14474593 NA non-coding downstream 225810 14471796 ~ 14474770 (+)
G58382 NA other upstream 202216 14039757 ~ 14039901 (+)
G58028 NA other upstream 1098509 13140378 ~ 13143608 (+)
G57701 NA other upstream 1218979 13006643 ~ 13023138 (+)
G57691 NA other upstream 1323652 12906444 ~ 12918465 (+)
G57682 NA other upstream 1349778 12825469 ~ 12892339 (+)
G58455 NA other downstream 2971 14246695 ~ 14258526 (+)
G58558 NA other downstream 253212 14496936 ~ 14501514 (+)
G58649 NA other downstream 406000 14649724 ~ 14652022 (+)
G58711 NA other downstream 522935 14766659 ~ 14773773 (+)
CI01000009_14857765_14859526 NA other downstream 575495 14857713 ~ 14859636 (+)

Expression


Co-expression Network