G209236


Basic Information

Item Value
gene id G209236
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 31216615 ~ 31217148 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU283972
ATGGAATTTCATCTGCCAAAACAGAAGCAAGAGAAATTGCAGagaaattacaggtagatatGACATTTCCAGTGGCAAGACAAAGAAGAACAACTCGCAAGTTCCTTTATGAGGGAAAGGACGAAGTTCAGCTTACACCAGAACAGCGTTTtaatcaggatttttttttcccctgattGATACAGCACTAATCAGTATCAGTGAAAGGTTCACCCAAGTcgatgttttcttttctttgtttggaTTTTTGTACTCTGCAAATAACATGAAGAAGGCAATTCAAGAGGACACTCTGGAGGACTCATGTAAGAAACTGGAGCGCACACTGGGTGATGTTGACAGCCAAGACCTGGTTCTGGAAGTGAGGGCAGCTCACTTCACATCTCTTCTCCTGCAAATATTTTAGATTACATTTACAAGGAGAATCTCTTGGAGCTTTATGGCAATTTAAGCATTGCCCTGCGCTTACTCTTGACATTGCCCATCACTGTTGCTTCAGGAGAAAGAAGCTTCTCCTccttaaaactgataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU283972 True 534 lncRNA 0.41 1 31216615 31217148

Neighbor

gene id symbol gene type direction distance location
LOC103021866 LOC108424141,LOC107550873,LOC108269199,LOC107694980,LOC107756464,LOC107741111 coding downstream 826370 30363293 ~ 30390245 (-)
LOC103038627 LOC108424200,LOC107694978,LOC107680612,LOC108269149 coding downstream 1021237 30168101 ~ 30195378 (-)
LOC103023888 ntrk3a,LOC105018511,LOC108269325,LOC108438531 coding downstream 1106575 30061148 ~ 30110040 (-)
LOC103042757 klhl25,LOC106560960,LOC107581825,LOC107714043 coding downstream 1744735 29434479 ~ 29471880 (-)
LOC103039163 sv2bb,LOC108444497,LOC107654137,LOC107583122,LOC107714041,LOC107720517 coding downstream 2059047 29043975 ~ 29157568 (-)
LOC103031457 NA coding upstream 37199 31254347 ~ 31260863 (-)
LOC103031775 NA coding upstream 47423 31264571 ~ 31266955 (-)
LOC103032100 NA coding upstream 60029 31277177 ~ 31282581 (-)
rapgef2 rapgef2 coding upstream 72986 31290134 ~ 31382522 (-)
LOC103044229 LOC103044229,LOC108430909 coding upstream 859443 32076591 ~ 32116564 (-)
G209208 NA non-coding downstream 196235 31020100 ~ 31020380 (-)
G209189 NA non-coding downstream 378875 30811716 ~ 30837740 (-)
G209184 NA non-coding downstream 459108 30756306 ~ 30757507 (-)
G209177 NA non-coding downstream 473946 30742426 ~ 30742669 (-)
G209166 NA non-coding downstream 778827 30437318 ~ 30437788 (-)
G209254 NA non-coding upstream 54688 31271836 ~ 31272348 (-)
G209261 NA non-coding upstream 68004 31285152 ~ 31285360 (-)
G209301 NA non-coding upstream 298811 31515959 ~ 31516197 (-)
G209304 NA non-coding upstream 301884 31519032 ~ 31519276 (-)
G209329 NA non-coding upstream 528437 31745585 ~ 31745994 (-)
G209224 NA other downstream 116754 31098844 ~ 31099861 (-)
fstl5 fstl5,LOC107550871 other downstream 413259 30513907 ~ 30803356 (-)
LOC103038932 ldb2a,LOC108424199,LOC107756465,LOC107694979,LOC107680613,LOC107550874,LOC107741120 other downstream 898399 30201531 ~ 30318216 (-)
G209127 NA other downstream 1053642 30162457 ~ 30162973 (-)
G209090 NA other downstream 1192065 30023961 ~ 30024550 (-)
G209256 NA other upstream 56720 31273868 ~ 31274402 (-)
G209303 NA other upstream 300285 31517433 ~ 31517892 (-)
gar1 gar1,LOC106513240,LOC107756508,LOC107680945,LOC107586061 other upstream 1412146 32629294 ~ 32639929 (-)
G209458 NA other upstream 1738467 32955615 ~ 32956085 (-)
G209529 LOC103042373,LOC108425009,LOC108268400,LOC107730658,LOC107756507,LOC107667842,LOC107550901 other upstream 2384951 33602099 ~ 33604989 (-)

Expression


Co-expression Network