CI01000009_14248805_14255014


Basic Information

Item Value
gene id CI01000009_14248805_14255014
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14247643 ~ 14255775 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_14248805_14255014.mRNA
ATGAGGGGAAAATTACTGCTGCTGCCCCGAGTGTGAACTTCCGACAGCCAAGTCAGTAGGATATTAAATTTATTTAAAGATGCCTGGCTAATATCCTTTGTAGTCTGGTTTAACTATTTCCCTTAAGTCAACACTGCATATACAGGCAAGGCGCAAACATCAGAGATGTGTAAACATTTGGTCAAAGCGTACCTTGTAAACTAGCTCCTCTGTAATATCAACAATATTGGCTCCTGTGTTGAAAGTACAGGTATCGAGGGACGTAGTAAACTTGCAGGGTATTGCTCGCTGTGCGCTAATAAGTGGAGGAGAAAACCGATACCATTTACAGACGTATGACCTTCTCTTATTCTCCAGTTACAACACAAGGGATCAGAAGCTTTGGCCCATTAGCAAGAGTCATTAACACAAGTCTAAGTGCAAGTGGTCTAACACAACAACAGCACTGTTGCAGACTCGCTGGCTCCAAAGTAGGGTAAGATGCTCTGGTCCAGTTAAAACAAAGCAGAAAAAACCCCAAAGAAAAACAGACTTCTTCTTTGGATTGGGTACCATCGCTGGTCACTGTGTGAGTTCTTGGCAAGGTGTCGCAATAGTCCAGGTCTGACTGTATGTAGCAGGACTGGGCATGAGAATAATGCTCTGCTGTTTCTCCTTTGGAAAACAACACTCAATGGTCCCAACTTCTAAGAAATGGAGACAATCTCAACATTGACTGCAATGCCTGAAACAACACTGTCAACCTCTATAGGACCCCCAGAATGGGGGTTACGACACCCAGAGCGAAGCAGAGGAACAGGTCACAGTGTGGAATGACGGGGAGAAGCAAGGATAGTGTGCAGAAACCAGCTGGCCGGCACAGCTGGGGCTCATGGAACCCACCGGGTGACATCTGCAGTTCTGAGGCCAAGGGCGGACAAGCTTTCCTCCATCCAACATCAACATCAGCCTGCGCTCTATTCTGTCTCTATCCCAACGCTACACAACATCTGGTCATCTACAACACCCCCAGACACAGCAAGCCAGGCACACACAAGCCAAACCCCGGCAACCGTTTGCTTGACAGAAAGACTGATATCCACAAAGGGTTCATCCAATCTGCTGTATATCATTACACAGGAATTATGTTCAGAGAAAACCTCATTAACCCCACCTGCAATTCAGTGACACAAAAAGCCCTGAGGAAGAAAAATAAAAAGGAGCTGGAGGTGACGCACAGCAGAAATGCCAGTTTCTTGGAGGAGGAATTTGAGAACAAAGCTGCCATTCTGCTTTTCCCAGAAACAGGGTTACGAAGAAAAGATCTTCGTTATGTGTTGAATTCCAATGAAGATAAAGATGAGACTTCGGTCCTGACGATCAGCTGAGACAGGTCATTAGTACCTCCTGCCTGAGAGACAGACACTCAAACTCATTAATACATAGGATATTTTCCCTCAGGGAGCTCAGGGCATCATTCATCTCCTGTGTGTTTTTTTTCCTCTCAAGCACTGCTGTGAAATTCCCACTCCGCTGAACTTGCAAAAAGCTCCTACATCCCCGAGCAGCCCAGGATGAATGAGCAATCTACCGGCAAGTCACTCGAGAACTACAAACGGCAGGCCTGAGAGGAAAACTTTATGGCATGGAAATGGTTTTTTGTATTGTTTAAACTCTGGCAAATGTGAGGAACACTTTTAAATGTTACAGAACAACATTGGCTGAAAACAAATGCTGGGTCAGGGGGTTAGAATACATGCCTTAAACACATGGGACTTACGTGGAACATGTAGATTTGATTCCGTGTGACTGATTTTGTGAATCGATGTGTTTCATGAAACATCTTTTGTTGTCAGTATTGACTTACCCGTATGTCTTTTCAAATTCATATGACGTTTTTCTACTGAACAAGTGAGTTTTTGAAGAATATCCAGGTTTATTTTTTCCATATAATGAAAGTCAATTAAACTGGGGCTGTCAAGCTACAAAATTATTAAAATAAATAAATAAATAAATAAATAAATAAAAGTGGTCCATATGATTAGATTGTTGTATTATACGTCTTCTGAAGCCATGTAAAAGCTTACATATAAAATATTAAACTGTACACTACCTTTCAAAAGTTTGGGGTCAGTAGGATTTTTTATTAGTAATTTTATTCAGCAATTATGCATTAAAATAGATTGGCATTATTGGCATTTACCCAAACATGAGTTCATAAAAAGCAGTGTCTGAAATTCATGACCATCCACTTCACAAAACCAGCCAATCATTTGTTAATGAGACTGATTAAGCTTTCAGTGATTAGCAAACTGTAAAATGTCCAAATCGTATGAAAAGTCAAACAGAGTGAGCAGAAACCTGTAGACATAACACAATCTCTGAGGGGTTCATTTCAGCAAAGCCAGACCTCTGAGATACCAATACGAGTATATCAATTGTTAATAAGAGCTGGATGATGTGAACTTTTGAAATACACATGTTTGAGGGATCACAGCTCTTTGAAGCTACAAAAACACAGGTAGGAAACCCTAATACTGATGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_14248805_14255014.mRNA True 2529 mRNA 0.41 5 14247643 14255775

Neighbor

gene id symbol gene type direction distance location
CI01000009_14201347_14205288 NA coding downstream 41756 14201115 ~ 14205887 (-)
CI01000009_14052206_14053489 NA coding downstream 193690 14051969 ~ 14053953 (-)
CI01000009_14012800_14024940 ITGB2 coding downstream 222412 14011950 ~ 14025231 (-)
CI01000009_13990326_14004387 VIL1 coding downstream 242817 13989732 ~ 14004826 (-)
CI01000009_13983271_13988001 NA coding downstream 259295 13983208 ~ 13988348 (-)
CI01000009_14342067_14344332 NA coding upstream 86212 14341987 ~ 14344934 (-)
CI01000009_14476688_14573629 HDAC4 coding upstream 219949 14475724 ~ 14573629 (-)
CI01000009_14626182_14652953 NA coding upstream 370056 14625831 ~ 14653259 (-)
CI01000009_14763341_14773678 NA coding upstream 507437 14763212 ~ 14773681 (-)
CI01000009_14776978_14779978 CX43.4 coding upstream 521084 14776859 ~ 14781953 (-)
G59602 NA non-coding downstream 32790 14164892 ~ 14214853 (-)
G59636 NA non-coding downstream 46643 14199911 ~ 14201000 (-)
G59626 NA non-coding downstream 58480 14188385 ~ 14189163 (-)
G59610 NA non-coding downstream 71199 14176003 ~ 14176444 (-)
G59552 NA non-coding downstream 171810 14075624 ~ 14075833 (-)
G59590 NA non-coding upstream 358323 14614098 ~ 14711193 (-)
G59583 NA non-coding upstream 427094 14682869 ~ 14684152 (-)
G59754 NA non-coding upstream 460343 14716118 ~ 14716332 (-)
G59768 NA non-coding upstream 480242 14736017 ~ 14736281 (-)
G59490 NA other downstream 209770 14033564 ~ 14037873 (-)
CI01000009_13975122_13976026 NA other downstream 269029 13975099 ~ 13978614 (-)
G59097 NA other downstream 1958125 12288217 ~ 12289518 (-)
CI01000009_08858198_08860555 NA other downstream 5387080 8856310 ~ 8860563 (-)
G55814 NA other downstream 5819631 8425821 ~ 8428012 (-)
G59811 NA other upstream 606622 14862397 ~ 14887464 (-)
G59941 NA other upstream 876329 15132104 ~ 15132503 (-)
CI01000009_15318811_15390382 TNS1 other upstream 1120485 15318811 ~ 15390382 (-)
CI01000009_15654061_15662554 ARPC2 other upstream 1391000 15653760 ~ 15663026 (-)

Expression


Co-expression Network