G209329


Basic Information

Item Value
gene id G209329
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 31745585 ~ 31745994 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU284081
gccgagtggtccagcggtctaaggcgctgccactatgagcaggaggtcgcaggttcgaatcccagctcatgcagctttgccatcaagctgccggcatcagagggagcaaaattggccctgctccctctgggtgggtagatggcgctctctccccacatcactcccagggtaatggctgcagcacagggcatctgtgagctgatgtaccggaaccgctttcctgcatcagcagcagctcgaaaagaagcggtggctggcttcacatgtatcggaggaagcatgtgttagtcttcaccctcctggtgtgttggggcatcactagtgatagggggagtcctaatgagtgggttgggtaattagccgtgtaaattggggagaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284081 True 382 lncRNA 0.56 2 31745585 31745994

Neighbor

gene id symbol gene type direction distance location
rapgef2 rapgef2 coding downstream 363063 31290134 ~ 31382522 (-)
LOC103032100 NA coding downstream 463004 31277177 ~ 31282581 (-)
LOC103031775 NA coding downstream 478630 31264571 ~ 31266955 (-)
LOC103031457 NA coding downstream 484722 31254347 ~ 31260863 (-)
LOC103021866 LOC108424141,LOC107550873,LOC108269199,LOC107694980,LOC107756464,LOC107741111 coding downstream 1355340 30363293 ~ 30390245 (-)
LOC103044229 LOC103044229,LOC108430909 coding upstream 330597 32076591 ~ 32116564 (-)
LOC103043705 LOC107680975,LOC107730661,LOC107696296 coding upstream 846703 32592697 ~ 32601011 (-)
LOC103043395 adh5,LOC103043395,LOC108425010,LOC107680974,LOC107730660,LOC107696300,LOC107586060,LOC107756510 coding upstream 856215 32602209 ~ 32609908 (-)
LOC111195776 NA coding upstream 868926 32614920 ~ 32626576 (-)
grhpr grhpr,grhpra,LOC107550900,LOC107756505,LOC107730677,LOC105908753,LOC107680659 coding upstream 2054108 33800102 ~ 33812322 (-)
G209304 NA non-coding downstream 226309 31519032 ~ 31519276 (-)
G209301 NA non-coding downstream 229388 31515959 ~ 31516197 (-)
G209261 NA non-coding downstream 460225 31285152 ~ 31285360 (-)
G209254 NA non-coding downstream 473237 31271836 ~ 31272348 (-)
G209236 NA non-coding downstream 528437 31216615 ~ 31217148 (-)
LOC111195779 NA non-coding upstream 954067 32700061 ~ 32701470 (-)
LOC111195778 NA non-coding upstream 957454 32703448 ~ 32704069 (-)
G209406 NA non-coding upstream 1059305 32805299 ~ 32807680 (-)
G209433 NA non-coding upstream 1082868 32828862 ~ 32829063 (-)
G209440 NA non-coding upstream 1139696 32885690 ~ 32886052 (-)
G209303 NA other downstream 227693 31517433 ~ 31517892 (-)
G209256 NA other downstream 471183 31273868 ~ 31274402 (-)
G209224 NA other downstream 645724 31098844 ~ 31099861 (-)
fstl5 fstl5,LOC107550871 other downstream 942229 30513907 ~ 30803356 (-)
LOC103038932 ldb2a,LOC108424199,LOC107756465,LOC107694979,LOC107680613,LOC107550874,LOC107741120 other downstream 1427369 30201531 ~ 30318216 (-)
gar1 gar1,LOC106513240,LOC107756508,LOC107680945,LOC107586061 other upstream 883300 32629294 ~ 32639929 (-)
G209458 NA other upstream 1209621 32955615 ~ 32956085 (-)
G209529 LOC103042373,LOC108425009,LOC108268400,LOC107730658,LOC107756507,LOC107667842,LOC107550901 other upstream 1856105 33602099 ~ 33604989 (-)
G209640 NA other upstream 2424773 34170767 ~ 34212849 (-)
G209660 NA other upstream 2488924 34234918 ~ 34274593 (-)

Expression


Co-expression Network