G209458


Basic Information

Item Value
gene id G209458
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 32955615 ~ 32956085 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU284258
tgtgtgtgtgtgtgtgtgtgtgtgtcagcttctagtgtgcctgtgggggcggggtatggtaatccggggccagcggggcattatgggggtatgttttgggtgggttaaggggacctaccatctttgtgtgggatagctgggttggtggcctcagGGCTGTTTGTGATGTGGTGGCAGTTGGGtttcgctctcctagccttgttaaaggctataagtgggtggcaagcctgttaataaagagctgttgagtacttgcaatgagtctcccgagtcctccttcctcttccacgccacatttggtgtcagaagtggccCTGCTGGATGATATGGAGCTGCTGGCAGGGGAAATCGAACGGCTGAAGAGGATAATGGCGGACGAGGGGCAAGACTCACCAGCGGAGTGGACCCAGACCGGACGGCGCCAGCAGGCTGTCCGAAGGTCGAGCCCGCGGaacggatggcgcgaggacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284258 True 471 TUCP 0.58 1 32955615 32956085

Neighbor

gene id symbol gene type direction distance location
LOC111195776 NA coding downstream 329039 32614920 ~ 32626576 (-)
LOC103043395 adh5,LOC103043395,LOC108425010,LOC107680974,LOC107730660,LOC107696300,LOC107586060,LOC107756510 coding downstream 345707 32602209 ~ 32609908 (-)
LOC103043705 LOC107680975,LOC107730661,LOC107696296 coding downstream 354604 32592697 ~ 32601011 (-)
LOC103044229 LOC103044229,LOC108430909 coding downstream 839051 32076591 ~ 32116564 (-)
rapgef2 rapgef2 coding downstream 1573093 31290134 ~ 31382522 (-)
grhpr grhpr,grhpra,LOC107550900,LOC107756505,LOC107730677,LOC105908753,LOC107680659 coding upstream 844017 33800102 ~ 33812322 (-)
mrpl18 mrpl18 coding upstream 884902 33840987 ~ 33844951 (-)
LOC111195843 NA coding upstream 896984 33853069 ~ 33854406 (-)
pdgfc pdgfc coding upstream 953024 33909109 ~ 34001611 (-)
fam198b fam198b coding upstream 1255480 34211565 ~ 34220540 (-)
G209452 NA non-coding downstream 2098 32953027 ~ 32953517 (-)
G209440 NA non-coding downstream 69563 32885690 ~ 32886052 (-)
G209433 NA non-coding downstream 126552 32828862 ~ 32829063 (-)
G209406 NA non-coding downstream 147935 32805299 ~ 32807680 (-)
LOC111195778 NA non-coding downstream 251546 32703448 ~ 32704069 (-)
G209546 NA non-coding upstream 793092 33749177 ~ 33749516 (-)
G209579 NA non-coding upstream 825658 33781743 ~ 33782007 (-)
G209571 NA non-coding upstream 841217 33797302 ~ 33799205 (-)
G209576 NA non-coding upstream 875135 33831220 ~ 33834676 (-)
G209575 NA non-coding upstream 879213 33835298 ~ 33838826 (-)
gar1 gar1,LOC106513240,LOC107756508,LOC107680945,LOC107586061 other downstream 315686 32629294 ~ 32639929 (-)
G209303 NA other downstream 1437723 31517433 ~ 31517892 (-)
G209256 NA other downstream 1681213 31273868 ~ 31274402 (-)
G209224 NA other downstream 1855754 31098844 ~ 31099861 (-)
fstl5 fstl5,LOC107550871 other downstream 2152259 30513907 ~ 30803356 (-)
G209529 LOC103042373,LOC108425009,LOC108268400,LOC107730658,LOC107756507,LOC107667842,LOC107550901 other upstream 646014 33602099 ~ 33604989 (-)
G209640 NA other upstream 1214682 34170767 ~ 34212849 (-)
G209660 NA other upstream 1278833 34234918 ~ 34274593 (-)
egf NA other upstream 1664376 34620461 ~ 34656484 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other upstream 1753686 34709771 ~ 34759091 (-)

Expression


Co-expression Network