G209628


Basic Information

Item Value
gene id G209628
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 34168174 ~ 34168411 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU284490
tttatattcataaggttttaagagttcagaaatcaatatttggtggaataaccctggttttaaatcacagttttcatgcatcttggcatgttctcctccaccagtcttacacactgcttttggataactttatgccactcctggtgcaatctAACACACTATTTCCCTCACTATCTCATTCTGTCACTGTTTTtctatctttatctttctctctttatcactctacctatctatctcc

Function

GO:

id name namespace
GO:0022857 transmembrane transporter activity molecular_function
GO:0015318 inorganic molecular entity transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284490 True 238 lncRNA 0.36 1 34168174 34168411

Neighbor

gene id symbol gene type direction distance location
pdgfc pdgfc coding downstream 166563 33909109 ~ 34001611 (-)
LOC111195843 NA coding downstream 313768 33853069 ~ 33854406 (-)
mrpl18 mrpl18 coding downstream 323223 33840987 ~ 33844951 (-)
grhpr grhpr,grhpra,LOC107550900,LOC107756505,LOC107730677,LOC105908753,LOC107680659 coding downstream 355852 33800102 ~ 33812322 (-)
LOC111195776 NA coding downstream 1541598 32614920 ~ 32626576 (-)
fam198b fam198b coding upstream 43154 34211565 ~ 34220540 (-)
tmem144 NA coding upstream 53468 34221879 ~ 34229881 (-)
LOC103036564 LOC103036564,LOC108425002 coding upstream 491079 34659490 ~ 34674207 (-)
gpm6a gpm6aa,dmb,LOC107602593,LOC108425001,LOC107569837,LOC107669084,LOC107662965,LOC105906175 coding upstream 507715 34676126 ~ 34708056 (-)
spata4 spata4 coding upstream 558751 34727162 ~ 34731836 (-)
G209625 NA non-coding downstream 16506 34136212 ~ 34151668 (-)
G209623 gria2,gria2b non-coding downstream 40398 34124362 ~ 34127776 (-)
LOC111195844 NA non-coding downstream 94580 34071114 ~ 34073594 (-)
G209575 NA non-coding downstream 329348 33835298 ~ 33838826 (-)
G209576 NA non-coding downstream 333498 33831220 ~ 33834676 (-)
LOC111195783 NA non-coding upstream 2345 34170756 ~ 34188629 (-)
G209682 NA non-coding upstream 217734 34386145 ~ 34386635 (-)
G209798 pitx2,LOC100136798,LOC107699310 non-coding upstream 395028 34563439 ~ 34566518 (-)
G209793 NA non-coding upstream 441625 34610036 ~ 34613396 (-)
G209814 NA non-coding upstream 464374 34632785 ~ 34633216 (-)
G209529 LOC103042373,LOC108425009,LOC108268400,LOC107730658,LOC107756507,LOC107667842,LOC107550901 other downstream 563185 33602099 ~ 33604989 (-)
G209458 NA other downstream 1212089 32955615 ~ 32956085 (-)
gar1 gar1,LOC106513240,LOC107756508,LOC107680945,LOC107586061 other downstream 1528245 32629294 ~ 32639929 (-)
G209303 NA other downstream 2650282 31517433 ~ 31517892 (-)
G209256 NA other downstream 2893772 31273868 ~ 31274402 (-)
G209640 NA other upstream 2356 34170767 ~ 34212849 (-)
G209660 NA other upstream 66507 34234918 ~ 34274593 (-)
egf NA other upstream 452050 34620461 ~ 34656484 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other upstream 541360 34709771 ~ 34759091 (-)
G210059 NA other upstream 2542009 36710420 ~ 36710743 (-)

Expression


Co-expression Network