G209660


Basic Information

Item Value
gene id G209660
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 34234918 ~ 34274593 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU284540
ggtttattctaatgttatatagagttaattacagttagacactctcactgagcactgactttatgtttttattctaaTGGTATATTTTATAGTGTTTACAGCACACCATTGCTGCTGGTActgcaggTGGcattggtctgtttttctgcacagtGTTCAGATAATTCATGAAAAACACATCCCTGAGAGTGCTGGAAACTGTGGCCACTGTCATAGTGATGAATGATGTCATCATAGTGACAGGACATCTCCATTTTGACTGATGCTATCCCAGCAAATTATGCTGTTGCTGTACCTACAGAGGACTTCTCCATTTGGACTGATGTTGTCAAAGCAACTGATGCTGTTGCCTTAGTGACAGACGTCATAATTTTGTCGGATAGAatcattattacaaataatgatgttatAGTGACTAAATGACTGAGGACGGCATAATTTTGACGCATGTTGTTGCCATAGCAACTGAAGATGTCATTGTAATAGCAAACATCACCATTTCAACTGAAGATGTCATACTGACTGATGCTGTTGTAGCTACAAAATGCTGAGTGATGATGTCACAGCAAACAATGTAATTTTGGCAGTAATGGAGAGCGGAATAATTCTGACTGATATTGATGTTGTTGCCGTAGTAACAGAAgtcattcattattttgactGATGTCATTTTAGTCACagaattatcattattatgaaCAATGATGTTGAAGATGTTATTATGATAGAAGACATCACCATTTAAACTGATGCTGTCAAAGTAACTGATGCTGTAAGCTACAACATTCTGACTGATGAAGTCATACCAACCAACATAGTTATTGCAGTGATGGAGAGTGGCATAATTCTAACTGATACTAATACTGATGACATCACAGCAACCAATGCTGTTGCCATAGTGACAGAGGTCATCGGCCATTATCATTATTCTGACCGATGATGTTATAGTGACTTAATGACAGAGGACGGCATCATTTTGACTCCTGTTGATGTTGCCATAGCAACCGAGGATGCCATTATGATAAAAGACATCACCATTTGGACTCATGCTGTTAAAGTGACTGTTGCTCTTGTAGCTGCAAACGATGTCGTTTTGGTAGTAATGGAGAGCGGAATAATTTCGACTGATATTGATGACATTCCAGCGACTGATGCTGTTGAGATCATCATTTTGACTGATGTCATTGTTGTCACAGAATCATCATTAATATGACCGATGATGTTGTCCTGACTTAATGACGGCATCATTTTGAATGATGTTGCTGTTGTTATAGCAAATGAGGATGTTATTATGATAGAGGACATCACCATTTGGACTGATGCTGTCACAGCGGCTGATGCTGTTGTAGCTACAACATTTTGACTGATGAGGTCATAGAAACCAATGTTGTTTTTGCAGCAACAGAGAGTGGCTTAAATCTGACTGATACTGATATTGATGACGTCACAGCCACTGATGCTCTTGCCATAGTAACAGAGGTCAGTCATTATTTTAACTGATGATGTCATTGTAAACATAGAATCCTCTTTATTTTTACCAATGATGTTGTAGTGACTTAATGACTGAGGACGGCACCATTCTAACTGATGTTGCTGTTGTTATAGCAACTGAGGATGTCATTGTGATAGAGGACATCAACATTTCACCCGAAGATGTCAAAGCAATGCAGATGATGGATTATGTTGATACTTATGATGTCATACTGTCTGATGCTGTTGCTCGCGTGATGGAGGTTGGTCATCATTGTGACTGATGCTGCTGTCATTTTGACAGCAGATGTTATGATGTAATGGCTGCAAAACTTGGACTTGATGACAGCTTCAGCTCATAGTGTTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284540 True 1838 TUCP 0.39 3 34234918 34274593

Neighbor

gene id symbol gene type direction distance location
tmem144 NA coding downstream 5037 34221879 ~ 34229881 (-)
fam198b fam198b coding downstream 14378 34211565 ~ 34220540 (-)
pdgfc pdgfc coding downstream 233307 33909109 ~ 34001611 (-)
LOC111195843 NA coding downstream 380512 33853069 ~ 33854406 (-)
mrpl18 mrpl18 coding downstream 389967 33840987 ~ 33844951 (-)
LOC103036564 LOC103036564,LOC108425002 coding upstream 384897 34659490 ~ 34674207 (-)
gpm6a gpm6aa,dmb,LOC107602593,LOC108425001,LOC107569837,LOC107669084,LOC107662965,LOC105906175 coding upstream 401533 34676126 ~ 34708056 (-)
spata4 spata4 coding upstream 452569 34727162 ~ 34731836 (-)
aga aga coding upstream 499469 34774062 ~ 34785667 (-)
ctso NA coding upstream 873038 35147631 ~ 35167225 (-)
LOC111195783 NA non-coding downstream 46289 34170756 ~ 34188629 (-)
G209628 NA non-coding downstream 66507 34168174 ~ 34168411 (-)
G209625 NA non-coding downstream 83250 34136212 ~ 34151668 (-)
G209623 gria2,gria2b non-coding downstream 107142 34124362 ~ 34127776 (-)
LOC111195844 NA non-coding downstream 161324 34071114 ~ 34073594 (-)
G209682 NA non-coding upstream 111552 34386145 ~ 34386635 (-)
G209798 pitx2,LOC100136798,LOC107699310 non-coding upstream 288846 34563439 ~ 34566518 (-)
G209793 NA non-coding upstream 335443 34610036 ~ 34613396 (-)
G209814 NA non-coding upstream 358192 34632785 ~ 34633216 (-)
LOC111195784 NA non-coding upstream 850570 35125163 ~ 35145580 (-)
G209640 NA other downstream 22069 34170767 ~ 34212849 (-)
G209529 LOC103042373,LOC108425009,LOC108268400,LOC107730658,LOC107756507,LOC107667842,LOC107550901 other downstream 629929 33602099 ~ 33604989 (-)
G209458 NA other downstream 1278833 32955615 ~ 32956085 (-)
gar1 gar1,LOC106513240,LOC107756508,LOC107680945,LOC107586061 other downstream 1594989 32629294 ~ 32639929 (-)
G209303 NA other downstream 2717026 31517433 ~ 31517892 (-)
egf NA other upstream 345868 34620461 ~ 34656484 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other upstream 435178 34709771 ~ 34759091 (-)
G210059 NA other upstream 2435827 36710420 ~ 36710743 (-)
c24h12orf73 NA other upstream 2534714 36809307 ~ 36810496 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other upstream 2890441 37165034 ~ 37204385 (-)

Expression


Co-expression Network