G209682


Basic Information

Item Value
gene id G209682
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 34386145 ~ 34386635 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU284562
atttttcccattttctccccaatttacacggccaattacccaacccactcattaggactccccctatcactagtgatgccccaacacaccaggagggtgaagactaacacatgcttcctccgatacatgtgaagtcagccaccgcttcttttcgagctgctgctgatgcagcattgccgagcagccagcgcgcttggaggaaagcacagcggctcggctccggtacatcagctcacagacgccctgtgctgctgacatcaccataggagtgatgtggggagagagcgccatctacccacccagagggaacagggccaattttgctccctctaacgccggcagcttgatggcaaagctgcatgagctggggttcgaaccggcgacctcctgctcaaaTGATatactttttaagattttaatagtttttagcTTCTTagagaaaaacacttttaggGTTGCTTAAGCCCACTCTAAATACAAGGACTAGCGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284562 True 491 lncRNA 0.51 1 34386145 34386635

Neighbor

gene id symbol gene type direction distance location
tmem144 NA coding downstream 156264 34221879 ~ 34229881 (-)
fam198b fam198b coding downstream 165605 34211565 ~ 34220540 (-)
pdgfc pdgfc coding downstream 384534 33909109 ~ 34001611 (-)
LOC111195843 NA coding downstream 531739 33853069 ~ 33854406 (-)
mrpl18 mrpl18 coding downstream 541194 33840987 ~ 33844951 (-)
LOC103036564 LOC103036564,LOC108425002 coding upstream 272855 34659490 ~ 34674207 (-)
gpm6a gpm6aa,dmb,LOC107602593,LOC108425001,LOC107569837,LOC107669084,LOC107662965,LOC105906175 coding upstream 289491 34676126 ~ 34708056 (-)
spata4 spata4 coding upstream 340527 34727162 ~ 34731836 (-)
aga aga coding upstream 387427 34774062 ~ 34785667 (-)
ctso NA coding upstream 760996 35147631 ~ 35167225 (-)
LOC111195783 NA non-coding downstream 197516 34170756 ~ 34188629 (-)
G209628 NA non-coding downstream 217734 34168174 ~ 34168411 (-)
G209625 NA non-coding downstream 234477 34136212 ~ 34151668 (-)
G209623 gria2,gria2b non-coding downstream 258369 34124362 ~ 34127776 (-)
LOC111195844 NA non-coding downstream 312551 34071114 ~ 34073594 (-)
G209798 pitx2,LOC100136798,LOC107699310 non-coding upstream 176804 34563439 ~ 34566518 (-)
G209793 NA non-coding upstream 223401 34610036 ~ 34613396 (-)
G209814 NA non-coding upstream 246150 34632785 ~ 34633216 (-)
LOC111195784 NA non-coding upstream 738528 35125163 ~ 35145580 (-)
G209872 NA non-coding upstream 752815 35139450 ~ 35140107 (-)
G209660 NA other downstream 111552 34234918 ~ 34274593 (-)
G209640 NA other downstream 173296 34170767 ~ 34212849 (-)
G209529 LOC103042373,LOC108425009,LOC108268400,LOC107730658,LOC107756507,LOC107667842,LOC107550901 other downstream 781156 33602099 ~ 33604989 (-)
G209458 NA other downstream 1430060 32955615 ~ 32956085 (-)
gar1 gar1,LOC106513240,LOC107756508,LOC107680945,LOC107586061 other downstream 1746216 32629294 ~ 32639929 (-)
egf NA other upstream 233826 34620461 ~ 34656484 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other upstream 323136 34709771 ~ 34759091 (-)
G210059 NA other upstream 2323785 36710420 ~ 36710743 (-)
c24h12orf73 NA other upstream 2422672 36809307 ~ 36810496 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other upstream 2778399 37165034 ~ 37204385 (-)

Expression


Co-expression Network