G209793


Basic Information

Item Value
gene id G209793
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 34610036 ~ 34613396 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU284716
TTAAATTCCAATCAATAACAGCTTTATTACAGTGTATGTAGACATGTTGCATGTTTAAATACGCTCAAACTCAAAGTTCCTTCAAAAAGGGTCCGCTTTAGACCCTTGTCGGCATTGGTCTTTGGAATAGATGATGACGGACGCCGACCTCTAGCCTCAGGAATTAGGCCACACCCCATAGAGGGCAGCGCGGCCAGTGACTCATCGGCTCATAGAGGCTGAGTGAATCATGTTCGGGTAAAGAGCCGTGATGGTTGGATGATCAGCCAGGCCCATATAGTCCTCTCAgcgctgtgtttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU284716 True 310 lncRNA 0.46 2 34610036 34613396

Neighbor

gene id symbol gene type direction distance location
tmem144 NA coding downstream 380155 34221879 ~ 34229881 (-)
fam198b fam198b coding downstream 389496 34211565 ~ 34220540 (-)
pdgfc pdgfc coding downstream 608425 33909109 ~ 34001611 (-)
LOC111195843 NA coding downstream 755630 33853069 ~ 33854406 (-)
mrpl18 mrpl18 coding downstream 765085 33840987 ~ 33844951 (-)
LOC103036564 LOC103036564,LOC108425002 coding upstream 46094 34659490 ~ 34674207 (-)
gpm6a gpm6aa,dmb,LOC107602593,LOC108425001,LOC107569837,LOC107669084,LOC107662965,LOC105906175 coding upstream 62730 34676126 ~ 34708056 (-)
spata4 spata4 coding upstream 113766 34727162 ~ 34731836 (-)
aga aga coding upstream 160666 34774062 ~ 34785667 (-)
ctso NA coding upstream 534235 35147631 ~ 35167225 (-)
G209798 pitx2,LOC100136798,LOC107699310 non-coding downstream 43518 34563439 ~ 34566518 (-)
G209682 NA non-coding downstream 223401 34386145 ~ 34386635 (-)
LOC111195783 NA non-coding downstream 421407 34170756 ~ 34188629 (-)
G209628 NA non-coding downstream 441625 34168174 ~ 34168411 (-)
G209625 NA non-coding downstream 458368 34136212 ~ 34151668 (-)
G209814 NA non-coding upstream 19389 34632785 ~ 34633216 (-)
LOC111195784 NA non-coding upstream 511767 35125163 ~ 35145580 (-)
G209872 NA non-coding upstream 526054 35139450 ~ 35140107 (-)
G209894 NA non-coding upstream 694923 35308319 ~ 35308594 (-)
G209924 NA non-coding upstream 1034006 35647402 ~ 35648209 (-)
G209660 NA other downstream 335443 34234918 ~ 34274593 (-)
G209640 NA other downstream 397187 34170767 ~ 34212849 (-)
G209529 LOC103042373,LOC108425009,LOC108268400,LOC107730658,LOC107756507,LOC107667842,LOC107550901 other downstream 1005047 33602099 ~ 33604989 (-)
G209458 NA other downstream 1653951 32955615 ~ 32956085 (-)
gar1 gar1,LOC106513240,LOC107756508,LOC107680945,LOC107586061 other downstream 1970107 32629294 ~ 32639929 (-)
egf NA other upstream 7065 34620461 ~ 34656484 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other upstream 96375 34709771 ~ 34759091 (-)
G210059 NA other upstream 2097024 36710420 ~ 36710743 (-)
c24h12orf73 NA other upstream 2195911 36809307 ~ 36810496 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other upstream 2551638 37165034 ~ 37204385 (-)

Expression


Co-expression Network