CI01000009_14581261_14582899


Basic Information

Item Value
gene id CI01000009_14581261_14582899
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14580880 ~ 14582994 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_14581261_14582899.mRNA
GTATAAAATCATAATTCAACCAACAGGATACAGCTCCCATTAAGCTTCACTGCAACATGTTTATTCTTCATAAGACTAGAACAGTCTACAGCACTACCGAAATCAATCGATGCTCTTATCTTCCCCAGGCTCATGCTATCATCTACAGGACAATTATCTTCTCATCCAGTCAACTACTGGAAGACAACGGCAAAAAAATAAACCCTCAATGTTCCTGAACCCAAGCCCTTAGTGCCATCTAAAAGCCCTGCTAACTTGTCCACCTGGACGGATGGGGCAGTAAAATTGCGCTTCACTGGAAGCCTTGAAATTTATTCCATTAATTCAAGTGCAGCGAAAATCACTGGTCACTGGCACCCACGCTTTACTCGGAGGCTTGCGATGAATACACAATTACAGCCTCTCAGGCACTGTAATCACAGCTTAAAGAGATGTGCATGGAAAACTGGCCGCTATCATCGAGGCGTGTCCGCCGAATCTCGCGGCAATGAAGGCATCGCCAATCCAGCCATCAGCGAGCCAAAACAAACAGAAAGAAAGCATGCTGTATGTACAGACACGCAATCCTTCATAGCGTGCCTATTTCTGAAAGCAGACTCCACCTCTAACAAGATGCTCCAGGCAATTCCCTCCAATGGTGGGATCGACCAGCAGCTGGAGCTATTTATATCCTCAGGTCCCCTAGCAGAGTAGCAGCTTGACTCGGCATGACTGGATTAGGATTAACTTGTGCTTCCAATCTATGACATTGATATTATGATTGTCCTGCTCAGGTCAGGTCGATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_14581261_14582899.mRNA True 788 mRNA 0.46 2 14580880 14582994

Neighbor

gene id symbol gene type direction distance location
CI01000009_14474300_14474593 NA coding upstream 106110 14471796 ~ 14474770 (+)
CI01000009_14432830_14450364 TWIST1.L, TWIST1, TWIST2, TWIST1B, TWIST1.S coding upstream 129338 14432716 ~ 14451542 (+)
CI01000009_14380226_14386430 ASB1 coding upstream 194014 14380226 ~ 14386866 (+)
CI01000009_14348389_14374515 TRAF3IP1 coding upstream 205197 14348389 ~ 14375683 (+)
CI01000009_14296451_14314340 ADARB1A, ADARB1B, ADARB1 coding upstream 266531 14296451 ~ 14314349 (+)
CI01000009_14595691_14611767 NA coding downstream 12442 14595436 ~ 14612569 (+)
CI01000009_14616605_14620028 NA coding downstream 32377 14615371 ~ 14620238 (+)
CI01000009_14659692_14664324 NA coding downstream 76185 14659179 ~ 14664333 (+)
CI01000009_14682045_14685381 NA coding downstream 98660 14681654 ~ 14685420 (+)
CI01000009_14857765_14859526 NA coding downstream 274719 14857713 ~ 14859636 (+)
G58558 NA non-coding upstream 80634 14496936 ~ 14501514 (+)
G58454 NA non-coding upstream 177298 14402649 ~ 14403582 (+)
G58447 NA non-coding upstream 178490 14393814 ~ 14402390 (+)
G58456 NA non-coding upstream 181529 14304940 ~ 14399351 (+)
G58613 NA non-coding downstream 2062 14585056 ~ 14585281 (+)
G58614 NA non-coding downstream 2321 14585315 ~ 14585606 (+)
G58615 NA non-coding downstream 2696 14585690 ~ 14585910 (+)
G58616 NA non-coding downstream 3127 14586121 ~ 14586586 (+)
G58618 NA non-coding downstream 6697 14589691 ~ 14590156 (+)
G58455 NA other upstream 322354 14246695 ~ 14258526 (+)
G58382 NA other upstream 540979 14039757 ~ 14039901 (+)
G58028 NA other upstream 1437272 13140378 ~ 13143608 (+)
G57701 NA other upstream 1557742 13006643 ~ 13023138 (+)
G58649 NA other downstream 66730 14649724 ~ 14652022 (+)
G58711 NA other downstream 183665 14766659 ~ 14773773 (+)
CI01000009_14925314_14952223 NA other downstream 342235 14924621 ~ 14952571 (+)
G60028 NA other downstream 769053 15352047 ~ 15376169 (+)

Expression


Co-expression Network