CI01000009_14616605_14620028


Basic Information

Item Value
gene id CI01000009_14616605_14620028
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14615371 ~ 14620238 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_14616605_14620028.mRNA
CTATAAATAGCCTAGATCTCTAAAAGAGGAAGAGAGAGAGAGAAACGCTCACCGCAGGATACATGAGAGCATTAGCATTCACAAACACACACAGTAGCACAGGGACCATAAAACCTGCACATCTCATAATAATAAACCATAACAAAGAGGAAAGTGTGCATGCGGGGAATCTCACAAAACCTTTCAAGAACAAATAAAACATTGTTTTTTTCATTTTGAAATTATTTTCAAGACATTTAAGCATATTCTTCTTAAGCTCTCATTACTGTAATGTGAAAAAAAAATCATATAAACATTTATACATCATATTGTTTAGATTAATCAGCCAACATTTACTTTTTTTTAGCAATTTTGTGTAAATTAGTTGCCATCAAAAATATATATGAAATAATATATAAAATATATATTATGATATATAATAATTATATATATATATATATATATATATATATATATATTATAACATATATATAATAATAATTATATAATTTATGTATTTAGAATATATTTATAGTATTTAGTTTTTATTTATGCTGATAAATAAAAGTAATATAGTAAATTAATTATTTAGGTTTTGCTTTTACAATTACTGCATTACAATAAAAGCAATAAAAATAACCATTTAAATAATAATAAAATGATAATAATAATAAATAATAATAATGTATATAATAATAATGTAACAAAAGATTTATAATTCAAATAAGTGCTGCCATCAGGAAAAGATTAATGAAAAGACCCAAATAAATACATTTTAAAATATATTAAAATAGAAAAATATTTTACAATATTATAGTTTTTACTGTATTTTTAATCAAATAAATTCAGCCTCGGTGAGCAAACTAGACTATCTTACCGACCCCAAACTTTTGAATGGTTGTTAATTTATTTTAAATTATTTTAAAATTAAATAAAAAAAAATACAAATTAAATTATTGAAATATTAAATTAATTATTATTATTATTTTTTTAATTAATTAAAAAATAAATATTTTTAACATGTGAAAGATAAGTCAGACAGCAGGTTTCATGGCATTCTTCTCAGCTGTAATGAGTTTGTGTATGGCAGCGCCGGGAGCAGCCATTAATCTAACAATAATGAGCTTCAGATGCACTTCACACAAGTGAGCTTCCTGACATACTGACCCCAATGTGTCTCACACCTACTCGCTAAAGACAGACAGTGAATCACAGCCTGAGAGAGAGAGGAGAGAGAGAGAGACGGGGAGTTGAGATGAAGGAATGCAAAGACTTCATAGTGTTTAATTCATTAGACATTCCAGTCACAGTCTCGCCAGCGGCGGCAGGCGGTGACGGGGCTCAGGGTCGTTTCCACGGATCAACAGCATCGTCAGTTCCTCTGAAAGTGAAACTGGAGGGCTTTACGCGCCGATACAGGGTGTACGAGTTCAGGCTGGAGGAGCAGGAGGCAGATAAACAAGGCAGCCCACAGCAGTTACCTCGCTCAGCCGTGATTAGCCGCCTCTGTAACCCAGCACGCTCCGGCGCTAAACCCCGCTGAGTCCGGAGAACAAGGAACCTGCAGCAGACGGGTCGTAACAAACCGCCCCACATCGGCACACGTTACGACGCGCCTCGAGCCGGTAAGGATCTATTTAAAAGTGCCTAGCACACAGGTCTTGAGCTTTTAACAAACTTTTGTGTTTCCATGATGCTATTTTCAGCCATTTAGATTGAAGTCATCATTAATACATGCTGCTGCACAGCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_14616605_14620028.mRNA True 1732 mRNA 0.33 2 14615371 14620238

Neighbor

gene id symbol gene type direction distance location
CI01000009_14595691_14611767 NA coding upstream 2802 14595436 ~ 14612569 (+)
CI01000009_14581261_14582899 NA coding upstream 32377 14580880 ~ 14582994 (+)
CI01000009_14474300_14474593 NA coding upstream 140601 14471796 ~ 14474770 (+)
CI01000009_14432830_14450364 TWIST1.L, TWIST1, TWIST2, TWIST1B, TWIST1.S coding upstream 163829 14432716 ~ 14451542 (+)
CI01000009_14380226_14386430 ASB1 coding upstream 228505 14380226 ~ 14386866 (+)
CI01000009_14659692_14664324 NA coding downstream 38941 14659179 ~ 14664333 (+)
CI01000009_14682045_14685381 NA coding downstream 61416 14681654 ~ 14685420 (+)
CI01000009_14857765_14859526 NA coding downstream 237475 14857713 ~ 14859636 (+)
CI01000009_14862429_14898325 SLC4A3 coding downstream 241494 14861732 ~ 14898549 (+)
CI01000009_14916323_14920716 NA coding downstream 296027 14916265 ~ 14920795 (+)
G58631 NA non-coding upstream 6030 14609006 ~ 14609341 (+)
G58630 NA non-coding upstream 7305 14607086 ~ 14608066 (+)
G58623 NA non-coding upstream 16889 14598267 ~ 14598482 (+)
G58622 NA non-coding upstream 17469 14597589 ~ 14597902 (+)
G58676 NA non-coding downstream 84241 14704479 ~ 14710140 (+)
G58686 NA non-coding downstream 100650 14720888 ~ 14721094 (+)
G58713 NA non-coding downstream 143584 14763822 ~ 14764679 (+)
G58695 NA non-coding downstream 155699 14775937 ~ 14777316 (+)
G58735 NA non-coding downstream 192778 14813016 ~ 14813280 (+)
G58558 NA other upstream 113857 14496936 ~ 14501514 (+)
G58455 NA other upstream 356845 14246695 ~ 14258526 (+)
G58382 NA other upstream 575470 14039757 ~ 14039901 (+)
G58028 NA other upstream 1471763 13140378 ~ 13143608 (+)
G57701 NA other upstream 1592233 13006643 ~ 13023138 (+)
G58649 NA other downstream 29486 14649724 ~ 14652022 (+)
G58711 NA other downstream 146421 14766659 ~ 14773773 (+)
CI01000009_14925314_14952223 NA other downstream 304991 14924621 ~ 14952571 (+)
G60028 NA other downstream 731809 15352047 ~ 15376169 (+)

Expression


Co-expression Network