G210074 (LOC107712756)


Basic Information

Item Value
gene id G210074
gene name LOC107712756
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 36765414 ~ 36767551 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU285085
AGTTGCTCCTGATTGCGTATATTCATGCTCAGGTTATTCAAGGCATTCAGAGTCTGCACTCTAACATCAGGCACAGGGTCGGAGAGGAAGCCAGCTATGATGTGAAGGCCTCCAAATTCTCGGAGAAGGtcCTGGTTTACTGTAAAGGCAGAAGCGTTTCCTAATGTTTTGAGAACCTCTCGCCTCTCTGCTGGGTTTGGGCTACTCTGGAGAAGAGAAAGGAGCATGCTGAGGTGCCTTGGCTCCAGACTCCCAGGAGACTTTGAGAGAATTTCACTTGATGAGACTTCTGCGGTCAGATTCCCTCCGTCTTTCCTGCTTACGACATTAAATCCAGACACTTTGGCCATCAGGCTCCCCGGCTGTACGgcagtaatgttattttgtcTGGGCTTCGCTTTGTTTATCTCCGCATCTCCTCCGCGCCCGCGTAACAGCTTGTAAAGCCCATACGAGGCTCCAGCTCCTGCCAGGATTCCCAACAAAGCCTTCACATTAACATTACTTAACCGCGGTATGAGCCCATCTTCTCCCATCCTGCAGTCAACGTAGTGTTTCATTAGGACGTTTTAAATAATAGTTTCTGTTAAAGAAGCCCTTTACTGTCATGCCGGACAGCTCCGCATTTGT

Function

NR:

description
PREDICTED: armadillo repeat-containing protein 10-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285085 True 630 lncRNA 0.49 3 36765414 36767551

Neighbor

gene id symbol gene type direction distance location
LOC111195785 NA coding downstream 74090 36689599 ~ 36691324 (-)
rnf130 rnf130,LOC103033921,LOC107723823 coding downstream 1502006 35168540 ~ 35263408 (-)
ctso NA coding downstream 1598189 35147631 ~ 35167225 (-)
aga aga coding downstream 1979747 34774062 ~ 34785667 (-)
spata4 spata4 coding downstream 2033578 34727162 ~ 34731836 (-)
LOC107197706 NA coding upstream 22478 36790029 ~ 36792803 (-)
LOC103044642 nt5dc3,LOC108420239,LOC107716671,LOC107679628,LOC107590839,LOC107665729 coding upstream 25831 36793382 ~ 36804302 (-)
LOC103023613 NA coding upstream 54732 36822283 ~ 36827999 (-)
LOC103023303 NA coding upstream 60340 36827891 ~ 36836649 (-)
LOC103039285 klhl4,LOC107710306,LOC107563598,LOC103356419 coding upstream 184330 36951881 ~ 37003635 (-)
G210065 NA non-coding downstream 31208 36733790 ~ 36734206 (-)
G210014 NA non-coding downstream 147606 36617584 ~ 36617808 (-)
G210012 NA non-coding downstream 261519 36503639 ~ 36503895 (-)
G210004 LOC108438453 non-coding downstream 419591 36339313 ~ 36345823 (-)
LOC103047198 NA non-coding downstream 433665 36317651 ~ 36331749 (-)
G210076 armc10,LOC107753539,LOC107716641,LOC107665740,LOC107679576 non-coding upstream 2118 36769669 ~ 36770997 (-)
G210110 NA non-coding upstream 37580 36805131 ~ 36805452 (-)
G210107 tdg,LOC107574736,LOC107679604 non-coding upstream 48120 36815671 ~ 36822106 (-)
G210120 NA non-coding upstream 104028 36871579 ~ 36871944 (-)
G210169 NA non-coding upstream 340149 37107700 ~ 37108089 (-)
G210059 NA other downstream 54671 36710420 ~ 36710743 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other downstream 2006323 34709771 ~ 34759091 (-)
egf NA other downstream 2108930 34620461 ~ 34656484 (-)
G209660 NA other downstream 2490821 34234918 ~ 34274593 (-)
G209640 NA other downstream 2552565 34170767 ~ 34212849 (-)
c24h12orf73 NA other upstream 41756 36809307 ~ 36810496 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other upstream 397483 37165034 ~ 37204385 (-)
LOC103035726 LOC103035726,LOC108416673,LOC108268898,LOC107730672,LOC107601515,LOC107550867,LOC107680594,LOC107756447 other upstream 2760082 39527633 ~ 39540816 (-)
bend4 bend4 other upstream 2846164 39613715 ~ 39632176 (-)
atp8a1 atp8a1 other upstream 2875993 39643544 ~ 39795943 (-)

Expression


Co-expression Network