c24h12orf73


Basic Information

Item Value
gene id c24h12orf73
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 36809307 ~ 36810496 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU285129
TACAAATGGACTCGACCGTGACGGCGGCGTGCAGACCGGACAGACCAGAGACATTACAGATATTTAACGTTAGCTAAAGTGCTGATAAAAATATGACCATTTAGGTTCACACTCGAGTCATCAGACTTAATCTAGACAGATTAAGAGAGGGGCAAAAGTAACTGTCCATAATCACAAATCTGAGGATGCCAGCTGGAGTGTCTTGGCCAAGATACCTGAAAATGTTCGGTGCCAGCGTACTATCCATGTTTGCTGGCGCTGAGGTCGTACATCAGTATTACCGTCCAGATTTGacCATTCCAGACGTTCCACCTAAGCCTGGAGAACTGCGGACAGAGCTTCTTGGACTAAAGGCGAGACAGGCAGCGCCAGAAAAACATTAATGTCACGTTTTGTATTTAAGTGTACATACTGATGTAAACAACACATTTACTTTTGAGATCTTCTTTGTGTAATAAATTATATGCTTT
>XM_007252896.3
ACCCCCAGCTCCTACAAATGGACTCGACCGTGACGGCGGCGTGCAGACCGGACAGACCAGAGACATTACAGATATTTAACGTTAGCTAAAGTGCTGATAAAAATATGACCATTTAGGTTCACACTCGAGTCATCAGACTTAATCTAGACAGATTAAGAGAGGGGCAAAAGTAACTGTCCATAATCACAAATCTGAGGATGCCAGCTGGAGTGTCTTGGCCAAGATACCTGAAAATGTTCGGTGCCAGCGTACTATCCATGTTTGCTGGCGCTGAGGTCGTACATCAGTATTACCGTCCAGATTTGacCATTCCAGACGTTCCACCTAAGCCTGGAGAACTGCGGACAGAGCTTCTTGGACTAAAGGCGAGACAGGCAGCGCCAGAAAAACATTAATGTCACGTTTTGTATTTAAGTGTACATACTGATGTAAACAACACATTTACTTTTGAGATCTTCTTTGTGTAATAAATTATATGCTTTTTCA
>XM_007252897.3
gcccctaaggtgacatcaaaAATCATCCATAGTCACTTCTAAtgaaggcgtgggaatgagatcctaaggcgtggAAGGGCAAAAGTAACTGTCCATAATCACAAATCTGAGGATGCCAGCTGGAGTGTCTTGGCCAAGATACCTGAAAATGTTCGGTGCCAGCGTACTATCCATGTTTGCTGGCGCTGAGGTCGTACATCAGTATTACCGTCCAGATTTGacCATTCCAGACGTTCCACCTAAGCCTGGAGAACTGCGGACAGAGCTTCTTGGACTAAAGGCGAGACAGGCAGCGCCAGAAAAACATTAATGTCACGTTTTGTATTTAAGTGTACATACTGATGTAAACAACACATTTACTTTTGAGATCTTCTTTGTGTAATAAATTATATGCTTTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285129 False 470 lncRNA 0.43 3 36809311 36810484
XM_007252896.3 True 486 mRNA 0.44 3 36809307 36810496
XM_007252897.3 False 401 mRNA 0.43 3 36809307 36809925

Neighbor

gene id symbol gene type direction distance location
LOC103044642 nt5dc3,LOC108420239,LOC107716671,LOC107679628,LOC107590839,LOC107665729 coding downstream 5005 36793382 ~ 36804302 (-)
LOC107197706 NA coding downstream 16504 36790029 ~ 36792803 (-)
LOC111195785 NA coding downstream 117983 36689599 ~ 36691324 (-)
rnf130 rnf130,LOC103033921,LOC107723823 coding downstream 1545899 35168540 ~ 35263408 (-)
ctso NA coding downstream 1642082 35147631 ~ 35167225 (-)
LOC103023613 NA coding upstream 11787 36822283 ~ 36827999 (-)
LOC103023303 NA coding upstream 17395 36827891 ~ 36836649 (-)
LOC103039285 klhl4,LOC107710306,LOC107563598,LOC103356419 coding upstream 141385 36951881 ~ 37003635 (-)
LOC103034997 NA coding upstream 193412 37003908 ~ 37038731 (-)
eef1g eef1g coding upstream 262090 37072586 ~ 37082206 (-)
G210110 NA non-coding downstream 3855 36805131 ~ 36805452 (-)
G210076 armc10,LOC107753539,LOC107716641,LOC107665740,LOC107679576 non-coding downstream 38310 36769669 ~ 36770997 (-)
G210074 LOC107712756 non-coding downstream 41756 36765414 ~ 36767551 (-)
G210065 NA non-coding downstream 75101 36733790 ~ 36734206 (-)
G210014 NA non-coding downstream 191499 36617584 ~ 36617808 (-)
G210107 tdg,LOC107574736,LOC107679604 non-coding upstream 5175 36815671 ~ 36822106 (-)
G210120 NA non-coding upstream 61083 36871579 ~ 36871944 (-)
G210169 NA non-coding upstream 297204 37107700 ~ 37108089 (-)
G210173 NA non-coding upstream 317198 37127694 ~ 37128205 (-)
G210197 NA non-coding upstream 417765 37228261 ~ 37228612 (-)
G210059 NA other downstream 98564 36710420 ~ 36710743 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other downstream 2050216 34709771 ~ 34759091 (-)
egf NA other downstream 2152823 34620461 ~ 34656484 (-)
G209660 NA other downstream 2534714 34234918 ~ 34274593 (-)
G209640 NA other downstream 2596458 34170767 ~ 34212849 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other upstream 354538 37165034 ~ 37204385 (-)
LOC103035726 LOC103035726,LOC108416673,LOC108268898,LOC107730672,LOC107601515,LOC107550867,LOC107680594,LOC107756447 other upstream 2717137 39527633 ~ 39540816 (-)
bend4 bend4 other upstream 2803219 39613715 ~ 39632176 (-)
atp8a1 atp8a1 other upstream 2833048 39643544 ~ 39795943 (-)
LOC103023530 LOC103023530,LOC108418701 other upstream 3122620 39933116 ~ 39940055 (-)

Expression


Co-expression Network