G210868


Basic Information

Item Value
gene id G210868
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 40054723 ~ 40055218 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU286234
TGATTACAtctttactctactctactcaaTTCATTTTATCCGGACACTGTTTTGTGCTACTTACCGTTAAGTTCACAGCCCACCAGCTCCATTCTCAGCGTGCAGGCTTTGCGGCACACGACTGGCAAAATGCGGATGTACTGAGCGATTATGGGTGGGTCAAACAGGTTGGTTTTGGTGCTGTCATTGTCTACATTTCCCGCAAAAATCTGTGTCTGTCTTCTTGCCCTCAGCTCTGTACAAGGTGTATGTACGTCCATCCAAACTGGAGGCCACCTTGAAGGATCTGATAAACTCAGCACTGCCCATGCGGCTGGCTCCCTGGGTGATTATGCCAGTGAAACGCATCTTCCTTTGCATGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU286234 True 363 lncRNA 0.48 2 40054723 40055218

Neighbor

gene id symbol gene type direction distance location
LOC103047731 abhd2,abhd2b,LOC108418794,LOC107753686,LOC107665722 coding downstream 20633 40022537 ~ 40034090 (-)
LOC103022288 ckmt1,LOC103022288,LOC108418758,LOC107753597,LOC107661454,LOC107554962,LOC107696262 coding downstream 46129 39995508 ~ 40008594 (-)
pdia3 pdia3,LOC107696263,LOC107716732,LOC107753598,LOC107573964,LOC107661453 coding downstream 66362 39982794 ~ 39988361 (-)
LOC103024064 LOC108416404 coding downstream 123044 39928564 ~ 39931679 (-)
LOC111195796 NA coding downstream 128078 39923198 ~ 39926645 (-)
LOC103029855 NA coding upstream 21619 40076837 ~ 40097960 (-)
LOC103046604 LOC108418995,LOC108268792,LOC107753548,LOC107666287,LOC107716682 coding upstream 110282 40165500 ~ 40220734 (-)
cartpt cartpt,LOC107679585,LOC107574592,LOC107666283 coding upstream 173621 40228839 ~ 40230309 (-)
c24h15orf40 NA coding upstream 191388 40246606 ~ 40249542 (-)
LOC103042952 LOC103042952,LOC107695597,LOC107577899 coding upstream 246941 40302159 ~ 40307383 (-)
G210873 NA non-coding downstream 18623 40035563 ~ 40036100 (-)
G210800 NA non-coding downstream 234820 39816624 ~ 39819903 (-)
G210799 grxcr1,si:dkey-109l4.6,LOC102787492 non-coding downstream 241159 39813339 ~ 39813564 (-)
G210772 LOC108418277,LOC108268893 non-coding downstream 550317 39503698 ~ 39504406 (-)
G210764 scyl1,ganab,LOC107741476,LOC107756491,LOC107601512 non-coding downstream 553790 39463107 ~ 39500933 (-)
G210934 NA non-coding upstream 17167 40072385 ~ 40074768 (-)
G210937 NA non-coding upstream 51386 40106604 ~ 40108923 (-)
G210949 NA non-coding upstream 82658 40137876 ~ 40138308 (-)
G210959 NA non-coding upstream 108115 40163333 ~ 40163550 (-)
G210994 NA non-coding upstream 316311 40371529 ~ 40372033 (-)
LOC103023530 LOC103023530,LOC108418701 other downstream 114668 39933116 ~ 39940055 (-)
atp8a1 atp8a1 other downstream 258780 39643544 ~ 39795943 (-)
bend4 bend4 other downstream 422547 39613715 ~ 39632176 (-)
LOC103035726 LOC103035726,LOC108416673,LOC108268898,LOC107730672,LOC107601515,LOC107550867,LOC107680594,LOC107756447 other downstream 513907 39527633 ~ 39540816 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other downstream 2850338 37165034 ~ 37204385 (-)
G210991 LOC103042126,LOC108416825 other upstream 306040 40361258 ~ 40363237 (-)
G210995 NA other upstream 317587 40372805 ~ 40378353 (-)
LOC103026726 cnot4,cnot4a,LOC107661486,LOC107753567,LOC107590814 other upstream 503466 40558684 ~ 40570148 (-)
LOC103035761 LOC108419823,LOC103035761,LOC105018411,LOC103373780,LOC104940444 other upstream 1104012 41159230 ~ 41219443 (-)
LOC103037199 tmem60,LOC108416913,LOC107661463,LOC107578479,LOC107753588,LOC107696252 other upstream 1251728 41306946 ~ 41310751 (-)

Expression


Co-expression Network