CI01000009_14961220_14973307



Basic Information


Item Value
gene id CI01000009_14961220_14973307
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14960980 ~ 14973405 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000009_14961220_14973307.mRNA
AGTGAACGCACAAAAACAATCTATTTAATCTATGGGTTTACAGCTCACGTTTAAAAAATTAAACATACAGAATGTAAGCAGACAGCAGGGCTGTAACCATGTGGTTTAGCAGAAGACGCCGACCTGTTGAAACCTCCTGTCATGTGCTTCGGGGTGGTGGAGGGGGAGCCGCAGTGTCACGTTTCTTTAGGGAAGGAGAACAAAAGGTGCCTAATTTCTTGCCTGAAGCACAGGAGTCCAAACCTGCGGGGAAATCTGTACAGAAATTTCAGTCTGCCAAGTCATGGGTTGCGGGATTGATTTCAAAGAGACAGCACCATGCTCTGATTGTAACTTCAGAAGCCAGGAAACCAATTCCTGTAATGACCAGGCACCCGCCCCATACGTCTCCAGATCATGAGTCAATAGAGCATGATGATACAGTGAAGCCAGACACGACTGAAGACCAGAGTCCTAAAATTCCCCTTAAAATTCCAGATGTAATCAACAGCAAGAAGCATGCTGCCGTGCGCAAGGACAAGAAGAAACAACAGGAGAAGCTTCGGTCACTGGGGCCGATGGATTACTCCCCCCTTCCCATCGACAAGCATGAGCCTGAATTTGGTCCCTGCAGAAGGAAGCTGGATGGAATCATTCAAAGTATGAAAGACACTTCACGCGTCATGGCTCTTTCCCTCTACCTGCCTAACTGTGACAGGAAGGGCTTCTTCAAGCGCAAGCAGTGCAAGCCCTCCCGTGGCCGAAAACGAGGCATCTGCTGGTGCGTGGACAAATATGGCGTGCAGCTGCCCGGCACTGACTACAGCGGCGGTAACATCCAGTGCAAGGATTTGGAGAACAGCAACAACAACGAAAAAGAAAAGGCCATTTCTGGAATCGTTTCGTATCAGATATTGTGGCATCTGGGCCGAGTTAAAATCGAGACAGATGCTGTAACCCTTAAACGCTCCCAGCATTCGCGTTTGAACTTTGACGGACGTTCGCCGTGCAGAGCGGGCGAAATCAGTAATCAGAGTTATCCAGGTCCTGATCCATGCCGAAAGCCCCCTCCCCCATTTAAAGAAAGCAGCTTGCACTTAATTCCTTACCTTGCCACACGTTTAGTGCCGTCTCAAAGTGAATCTCAGTTCAGTAATACAACTCTACCAATCACAGTCTCTTCTCCATCTACTCTTAATAGACTTTGCGTCTCAGTGATATCCGGGGAGAAGGAGAGCGGAGGTAAAAGACTATCGATTGCCAGGACGCAGCATGTTGCTTTTGTGCTTATCTGCTTTCATCAGATTCCGAATCTCCTACTTGGGTAGACAGCAGTGTTCATAACTCACACTACAGTAGAAACGACAGGTTTTCTTTCTTTCTCTGAATGCATAACAGTTTTTTTTTTTACTTTATTGATTTTTTTCTCTTTTTTTTTTGTGGATGAGAAAAGACTTGATGATTGACCACCTAAATGTGGCTTAAACTGGCATGTGAAAAAGACCCATTAGTGGCTGGAGGACTCTAAAAATGTTCAGCATTTGGAACTCTTATTAAAAACCAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000009_14961220_14973307.mRNA True 1547 mRNA 0.46 9 14960980 14973405

Neighbor


gene id symbol gene type direction distance location
CI01000009_14905408_14907785 NA coding downstream 52903 14904489 ~ 14908077 (-)
CI01000009_14776978_14779978 CX43.4 coding downstream 179027 14776859 ~ 14781953 (-)
CI01000009_14763341_14773678 NA coding downstream 187299 14763212 ~ 14773681 (-)
CI01000009_14626182_14652953 NA coding downstream 307721 14625831 ~ 14653259 (-)
CI01000009_14476688_14573629 HDAC4 coding downstream 387351 14475724 ~ 14573629 (-)
CI01000009_14974529_14974816 NA coding upstream 637 14974042 ~ 14975420 (-)
CI01000009_15229965_15235247 NA coding upstream 256252 15229657 ~ 15235528 (-)
CI01000009_15301177_15304489 NA coding upstream 327692 15301097 ~ 15304500 (-)
CI01000009_15318811_15390382 TNS1 coding upstream 345406 15318811 ~ 15390382 (-)
CI01000009_15483720_15484321 NA coding upstream 510304 15483709 ~ 15484321 (-)
G59818 NA non-coding downstream 69767 14889076 ~ 14891213 (-)
G59794 NA non-coding downstream 146696 14814079 ~ 14814284 (-)
G59768 NA non-coding downstream 224699 14736017 ~ 14736281 (-)
G59754 NA non-coding downstream 244648 14716118 ~ 14716332 (-)
G59583 NA non-coding downstream 276828 14682869 ~ 14684152 (-)
G59821 NA non-coding upstream 3284 14976689 ~ 14977258 (-)
G59898 NA non-coding upstream 117549 15090954 ~ 15091746 (-)
G59899 NA non-coding upstream 119069 15092474 ~ 15092737 (-)
G59913 NA non-coding upstream 129198 15102603 ~ 15102820 (-)
G59927 NA non-coding upstream 140354 15113759 ~ 15113970 (-)
G59811 NA other downstream 73516 14862397 ~ 14887464 (-)
G59490 NA other downstream 923107 14033564 ~ 14037873 (-)
CI01000009_13975122_13976026 NA other downstream 982366 13975099 ~ 13978614 (-)
G59097 NA other downstream 2671462 12288217 ~ 12289518 (-)
CI01000009_08858198_08860555 NA other downstream 6100417 8856310 ~ 8860563 (-)
G59941 NA other upstream 158699 15132104 ~ 15132503 (-)
CI01000009_15654061_15662554 ARPC2 other upstream 673370 15653760 ~ 15663026 (-)

Expression



Co-expression Network