LOC103035761 (LOC108419823,LOC103035761,LOC105018411,LOC103373780,LOC104940444)


Basic Information

Item Value
gene id LOC103035761
gene name LOC108419823,LOC103035761,LOC105018411,LOC103373780,LOC104940444
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 41159230 ~ 41219443 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU286833
tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttctttttttttttttttttttttaactttaaaagggACCAAATGGTTTTACTGTTTAATCCATAATTTCTGTAGCAAACAAGCACCCAGATAATTCTCATATCATCAGACTATTCCACTGCCTGTACATGTTAAATTTGGTAGAAACCATGAATTATGTGATATAACAGACATTCTCACAGTTATTTATGACAAATTTGAATGGTTTTATGCATTATGTCCCTCTGTTCTCATTGGTTGGGAACAAACATTGACTAATATCCACTATTTTGCTAATAAAATGTGCTGTGGTTAAATCATGGCATCTTGAAATAGAACTTcactt
>XM_007252865.3
TGTCACTCCTCATCGCAGCGGGGGAGAGAAAGGCTCGGCTAACGTTTGGCTGGAAGTTTTTCGGATTGCTGTCGTTTTAATCGGTTTGTTTTAGCAGAACATGAACAGGAGGGGGTAGCGTTGATTTTTAGCCCCGATAACTGTAAGTTTGAGCGTTTGATCGCGTGTTATTTCTGATTTAAACTGAAGAGTAGCTCGCAGCTGATCGACAGCAGCACTTTGTGAAGAGTTTGGGCGtgtggctgctgcttctccgtTTGACCAACTtgtgcatgttttatttttgaggtttttggttgtttttttaagaagaaGGAAGGCCTGGTTAAAAATGGGGTGCACTTTGAGCTCGGAGGATAAAGTGGCTCAGGAGAGGAGTAAAATGATCGACAGAAATTTGCGGGACGACGGAGAGAAAGCGGCGAGGGAGGTCAAGCTGCTTCTTCTGGGTGCTGGTGAGTCAGGGAAGAGTACAATTGTCAAACAGATGAAAATCATCCATGAGGCAGGCTACTCAGAGGAAGAATGCAAGCAGTACAAGGCCGTGGTGTACAGCAACACCATCCAGTCCATCATCGCCATCATCAGGGCCATGGGCCGCCTGAAGATCGATTTCTCCGACGCTGCCCGTGCTGATGATGCGAGGCAGTTGTTTGTGCTGGCTGGCTCAGCTGAGGAGGGCTACATGACTGGAGAGCTGGCTGGAATCATCCAGCGCCTGTGGAAGGATGGGGGAGTCCAGGCCTGCTTCAGCCGCTCCAGAGAGTACCAGCTCAATGACTCTGCTTCATACTACCTAAACGATCTGGACAGGATATCGAGCGCCGCATATGTCCCCACTCAGCAGGATGTCCTGAGAACCAGGGTGAAGACCACTGGTATTGTGGAGACCCACTTCACCTTCAAGGATCTTCATTTCAAGATGTTTGATGTGGGTGGCCAGAGATCAGAAAGGAAGAAATGGATCCACTGCTTTGAGGGGGTGACCGCCAtcattttctgtgtttctctgagCGACTATGACCTGGTCCTGGCTGAAGATGAGGAAATGAACCGGATGCACGAGAGCATGAAACTGTTTGACAGCATCTGCAACAATAAGTGGTTCACTGAGACCTCCATCATCCTCTTCCTCAATAAGAAGGATCTGTTTGAGGAGAAGATCAAGAGAAGCCCTCTCACCATCTGCTACCCAGAATACGCTGgctcCAACACTTACGAGGAGGCCGCTGCCTACATCCAGTGTCAGTTTGAGGACCTGAATAAGAGGAAGGACACCAAGGAGATCTACACCCACTTCACCTGCGCCACAGACACCAAGAATGTGCAGTTCGTCTTCGACGCCGTCACTGATGTCATCATCAAGAACAACCTGAAGGACTGTGGACTTTTCTAGAGCTCGCCGCCACACGTGAGAGGAAAAAGGGCGTGGCATCTTTGGGAGAAGCAGGGCTGGAGTGAGGTCAACCATGAACACGATGCGTTacgtaaacattttatttatgttctctgaacatttttaaatgatgttttagGAAAAAGAAACcttttgtgtaaaatatttgtacAACTGTAATTGTTGCTGgattttttcactgttttttggaataatttaCAGGTCCTTTTTTGAAGGGTATTTTTTCACTCTAAAAGGTTTTTGggaacattttttcttttctttttttccccccttctctctttctctactctAGATATGAAGGTACATGTGCCTTGCATGTTTGCAGTTACTGTTGCAGTGCTTGAGTTTGTCATCTAAGTTGTTCAAATGTAGCTGTAGTCGTCGATATGTAATCACTCGCCTAATGTGAGCACATTTCTTTGTAGATGCAAACCTGATTATTAAAACGCTCTTTTGTTAGACCAAATGCGAATAGCTGACAAAATTCCAAGGTATACTGTGTGAAGCCTGACCCATTTAGAGAGATTTCTCTGCGTGCTGCCCCTTCTTATCCACTTGGACGGGCTTTTTcagagcagctgtcgttaaacaGAATTTGCATGCATCATGTGAAATTCACCTGTAGTTGGAACGACGAATGATGACCAAGATACTCACTCAGAACTCAGAAAATAGCTAGAGGTTAGTGGAATGAGGCCGAATAAGGAACTCGGCACAGTTTCAAAGAGGAACGTTTTTCTAAAAAAAGATCGGAAAAAAAGTTCTGTTTAGAGGTGTAGACAAGGAAATGGGCATTTATTGATCAAAGGGagtagctttttttgtttttttgttttgtttgttgtttctttctttcattttctctcttttttttttttttaactttaaaagggACCAAATGGTTTTACTGTTTAATCCATAATTTCTGTAGCAAACAAGCACCCAGATAATTCTCATATCATCAGACTATTCCACTGCCTGTACATGTTAAATTTGGTAGAAACCATGAATTATGTGATATAACAGACATTCTCACAGTTATTTATGACAAATTTGAATGGTTTTATGCATTATGTCCCTCTGTTCTCATTGGTTGGGAACAAACATTGACTAATATCCACTATTTTGCTAATAAAATGTGCTGTGGTTAAATCATGGCATCTTGAAATAGAA

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(i) subunit alpha-1-like

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG:

id description
K04630 GNAI; guanine nucleotide-binding protein G(i) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
TU286833 False 390 lncRNA 0.25 2 41159230 41219443
XM_007252865.3 True 2593 mRNA 0.44 9 41159238 41176909

Neighbor

gene id symbol gene type direction distance location
LOC103021433 LOC108419726 coding downstream 7200 40983650 ~ 41152030 (-)
edc3 edc3,LOC107678287,LOC107716710,LOC107661473,LOC107753578 coding downstream 199699 40951018 ~ 40959531 (-)
LOC103033740 csk,LOC108419600,LOC106562350 coding downstream 213542 40913083 ~ 40945688 (-)
LOC103033419 cplx3,LOC103033419,LOC107753702,LOC107576377,LOC107678284,LOC107661513,LOC107554944 coding downstream 257066 40896892 ~ 40902164 (-)
adal adal,LOC107753575 coding downstream 262669 40891531 ~ 40896561 (-)
LOC103038802 NA coding upstream 15657 41235100 ~ 41253591 (-)
immp2l immp2l,LOC107716721,LOC107574088,LOC107696251,LOC107753590,LOC106573249 coding upstream 105514 41324957 ~ 41471949 (-)
dock4 dock4,si:dkey-81e3.1,LOC108268692,LOC107554957,LOC107661459 coding upstream 253910 41473353 ~ 41578514 (-)
LOC111195800 NA coding upstream 381663 41601106 ~ 41606198 (-)
tmem168 tmem168 coding upstream 388634 41608077 ~ 41615191 (-)
G211242 NA non-coding downstream 247594 40890814 ~ 40911636 (-)
G211141 LOC108419529,LOC108269134 non-coding downstream 433046 40718320 ~ 40726184 (-)
G211140 LOC108419529,LOC108269134,LOC108431712,LOC105892636,LOC107554941 non-coding downstream 441028 40715530 ~ 40718202 (-)
G211119 NA non-coding downstream 442117 40629372 ~ 40717113 (-)
LOC111195798 NA non-coding downstream 507184 40651665 ~ 40652046 (-)
G211450 NA non-coding upstream 634355 41853798 ~ 41865986 (-)
G211449 NA non-coding upstream 647317 41866760 ~ 41872555 (-)
G211517 NA non-coding upstream 861277 42080720 ~ 42080968 (-)
G211528 NA non-coding upstream 962933 42182376 ~ 42182687 (-)
G211532 NA non-coding upstream 973871 42193314 ~ 42195273 (-)
LOC103026726 cnot4,cnot4a,LOC107661486,LOC107753567,LOC107590814 other downstream 589082 40558684 ~ 40570148 (-)
G210995 NA other downstream 780877 40372805 ~ 40378353 (-)
G210991 LOC103042126,LOC108416825 other downstream 795993 40361258 ~ 40363237 (-)
LOC103023530 LOC103023530,LOC108418701 other downstream 1219175 39933116 ~ 39940055 (-)
atp8a1 atp8a1 other downstream 1363287 39643544 ~ 39795943 (-)
LOC103037199 tmem60,LOC108416913,LOC107661463,LOC107578479,LOC107753588,LOC107696252 other upstream 87503 41306946 ~ 41310751 (-)
LOC103022682 NA other upstream 373888 41593331 ~ 41600623 (-)
G211539 NA other upstream 985693 42205136 ~ 42205636 (-)
LOC103029763 NA other upstream 1062314 42281757 ~ 42361599 (-)
G211691 mrpl11 other upstream 1543758 42763201 ~ 42847764 (-)

Expression


Co-expression Network