fut11 (fut11,LOC107689135,LOC107710942,LOC107733430,LOC107663104)


Basic Information

Item Value
gene id fut11
gene name fut11,LOC107689135,LOC107710942,LOC107733430,LOC107663104
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 18337692 ~ 18343003 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228432.2
GTAAatggaagaggaagaggaggaataAACACAGCAGAGCTTCTCCACGTagctttatttactgtattttatttagtttctgtAGTTTAATCTCTTTAATTTGATCAGATCATATGAGGAGCGGAAGAGTTCAGACTGCGGCTGCGCGGTGAGGAGCTATGTTTGCAGGGGCTGTGCTTGTGATGCTGGTCTGGCTGGTACAGCTGTGGATGCTGCAGTGTGGAGGTCAGGAACCCGTAGACCTGCTGGACAGGAGTGTGTTTCAGCCCCAGAGCGCTCTGGCTGGTATGGACTTCGTCACTGTGAGCTCCTACAGAGGCCCAGGTAACACAGACACTCGCAGCAACAAGGAGCTCCCCATCCTCCTGTGGTGGAGCTCCAACCTCTTCCCCCACTTCCCTGGAGACACCGAGCGGGTGGACTGCGCCCACTCGTCCTGCCTGGTCACCAGAAACCGTAAGGTGCAGCTGCAGCGCCGCACGGCCTCCATCATCTTCTACGGAACGGATTTCCGGGCGTACGAGGCGCCGCTCCCTCGCCTGCCCCACCAGACGTGGGCGCTCTTCCACGAGGAGTCGCCCATGAACAACTACCTCCTGTCTCACGGCCCTGGCATCAGGCTGTTCAATTACACCGCCACCTTCAGGAGGGAGTCGGATTATCCCCTCACCCTGCAGTGGCTGCCCTCCCTGGAGTACCTCCTCCATCCTCCCTCCGTCTCTCTGCAGGAGAAGAACCGCTGGAGACAAGCCGGACTCGCTCCCGTCCTCTACATGCAGTCCCACTGTGACGTGCCCTCAGACCGAGACCGCTACGTCCAGGAGCTTATGAAGTATATAGAGGTGGACTCTTACGGGAAGTGTCTCAATAATAAGTCTCTACCTGAGCGTTTGGAGGACACCAGCACGGCTACAGGTGAGGAGAGGGAGTTTATGAGCTTTGTTGGACGCTACAAGTTCCACCTGGCGCTGGAGAACGGCCTGTGTCCTGATTATATGACGGAGAAGCTGTGGCGGCCCCTGCACCAGGGCTGCGTTCCCGTCTACAGGGGCTCGTCCTCGGTGTCCGACTGGCTTCCCAACGATCATTCGGCCGTTCTGATCGACAGCTTCTCCTCTCCTAAAGAACTCGCCGACTTCATCAGAGCTctggatgaggatgatgaggagTATCTGCACTACCTGGAGTTTAAAACCCCCAGTAAGATCACTAACCTGCGGCTCCTGGAGGGGCTCCAGAGCAGAGAGTGGGGCGTTAACGACATGAGCAAACCCAACTACCTGAACGGGTTCGAGTGTTTCGTCTGCGATCGGGAAAACGAGCGAATAGCAGCGCAGAAAGCTCACAGACGAAACCCAACCAAGTTCCCTAAACCACAGCCCAAAACCGCCAACAGCACCCACATGGGCTGCCCACTCCCCAGCCCTGGATACGGACACGCAGACGAGATCGACACCAATGATGGctggCTTCAGATGTGGCCGCAGGACTACTGGCAGAGTCTGGATCAGGCAGAGGGTCTGGAGTCTCTGATAAAACACAATGAGTCTGATCCAGGGCTGCTGTGGCACCACATTCACAGCATGGCTATGAAACGGAGCGGCGGCCAATAGCAGCAGGACGTAGCGGACCCTCTCCAAGGACGTATCGGACCCCGCGGTCGAACCACAGAGAGCTTTCACTGTGCCAAAGAACCTCAACTCAGGCCAAAACACCAGAACCCACTTCAGGTTCATCTCGCTGCTGGAGGAGAGCTGATCCTctacactgaaataaagataTTTACTGGGTTACAGTGAGCAGAGGATCTGCAGATATGGgtcaattacattaaattaaagacTTTTGTACACTTTTTTATACCACTTTGACACAATTAAGACcacttttataatatattataacaaaatgccaaaatataaacaacactAGTATTAAGTTTGCACACTTGGTGTGAAATGGTCctggttgt
>XM_007228433.3
AGCAGAGCTTCTCCACGTagctttatttactgtattttatttagtttctgtAGTTTAATCTCTTTAATTTGATCAGATCATATGAGGAGCGGAAGAGTTCAGACTGCGGCTGCGCGATGTTTGCAGGGGCTGTGCTTGTGATGCTGGTCTGGCTGGTACAGCTGTGGATGCTGCAGTGTGGAGGTCAGGAACCCGTAGACCTGCTGGACAGGAGTGTGTTTCAGCCCCAGAGCGCTCTGGCTGGTATGGACTTCGTCACTGTGAGCTCCTACAGAGGCCCAGGTAACACAGACACTCGCAGCAACAAGGAGCTCCCCATCCTCCTGTGGTGGAGCTCCAACCTCTTCCCCCACTTCCCTGGAGACACCGAGCGGGTGGACTGCGCCCACTCGTCCTGCCTGGTCACCAGAAACCGTAAGGTGCAGCTGCAGCGCCGCACGGCCTCCATCATCTTCTACGGAACGGATTTCCGGGCGTACGAGGCGCCGCTCCCTCGCCTGCCCCACCAGACGTGGGCGCTCTTCCACGAGGAGTCGCCCATGAACAACTACCTCCTGTCTCACGGCCCTGGCATCAGGCTGTTCAATTACACCGCCACCTTCAGGAGGGAGTCGGATTATCCCCTCACCCTGCAGTGGCTGCCCTCCCTGGAGTACCTCCTCCATCCTCCCTCCGTCTCTCTGCAGGAGAAGAACCGCTGGAGACAAGCCGGACTCGCTCCCGTCCTCTACATGCAGTCCCACTGTGACGTGCCCTCAGACCGAGACCGCTACGTCCAGGAGCTTATGAAGTATATAGAGGTGGACTCTTACGGGAAGTGTCTCAATAATAAGTCTCTACCTGAGCGTTTGGAGGACACCAGCACGGCTACAGGTGAGGAGAGGGAGTTTATGAGCTTTGTTGGACGCTACAAGTTCCACCTGGCGCTGGAGAACGGCCTGTGTCCTGATTATATGACGGAGAAGCTGTGGCGGCCCCTGCACCAGGGCTGCGTTCCCGTCTACAGGGGCTCGTCCTCGGTGTCCGACTGGCTTCCCAACGATCATTCGGCCGTTCTGATCGACAGCTTCTCCTCTCCTAAAGAACTCGCCGACTTCATCAGAGCTctggatgaggatgatgaggagTATCTGCACTACCTGGAGTTTAAAACCCCCAGTAAGATCACTAACCTGCGGCTCCTGGAGGGGCTCCAGAGCAGAGAGTGGGGCGTTAACGACATGAGCAAACCCAACTACCTGAACGGGTTCGAGTGTTTCGTCTGCGATCGGGAAAACGAGCGAATAGCAGCGCAGAAAGCTCACAGACGAAACCCAACCAAGTTCCCTAAACCACAGCCCAAAACCGCCAACAGCACCCACATGGGCTGCCCACTCCCCAGCCCTGGATACGGACACGCAGACGAGATCGACACCAATGATGGctggCTTCAGATGTGGCCGCAGGACTACTGGCAGAGTCTGGATCAGGCAGAGGGTCTGGAGTCTCTGATAAAACACAATGAGTCTGATCCAGGGCTGCTGTGGCACCACATTCACAGCATGGCTATGAAACGGAGCGGCGGCCAATAGCAGCAGGACGTAGCGGACCCTCTCCAAGGACGTATCGGACCCCGCGGTCGAACCACAGAGAGCTTTCACTGTGCCAAAGAACCTCAACTCAGGCCAAAACACCAGAACCCACTTCAGGTTCATCTCGCTGCTGGAGGAGAGCTGATCCTctacactgaaataaagataTTTACTGGGTTACAGTGAGCAGAGGATCTGCAGATATGGgtcaattacattaaattaaagacTTTTGTACACTTTTTTATACCACTTTGACACAATTAAGACcacttttataatatattataacaaaatgccaaaatataaacaacactAGTATTAAGTTTGCACACTTGGTGTGAAATGGTCctggttgt
>XM_007228434.3
CGGAGTTTTCCCCACTTACTCTATAAATGTGATAAGATGTTTGCAGGGGCTGTGCTTGTGATGCTGGTCTGGCTGGTACAGCTGTGGATGCTGCAGTGTGGAGGTCAGGAACCCGTAGACCTGCTGGACAGGAGTGTGTTTCAGCCCCAGAGCGCTCTGGCTGGTATGGACTTCGTCACTGTGAGCTCCTACAGAGGCCCAGGTAACACAGACACTCGCAGCAACAAGGAGCTCCCCATCCTCCTGTGGTGGAGCTCCAACCTCTTCCCCCACTTCCCTGGAGACACCGAGCGGGTGGACTGCGCCCACTCGTCCTGCCTGGTCACCAGAAACCGTAAGGTGCAGCTGCAGCGCCGCACGGCCTCCATCATCTTCTACGGAACGGATTTCCGGGCGTACGAGGCGCCGCTCCCTCGCCTGCCCCACCAGACGTGGGCGCTCTTCCACGAGGAGTCGCCCATGAACAACTACCTCCTGTCTCACGGCCCTGGCATCAGGCTGTTCAATTACACCGCCACCTTCAGGAGGGAGTCGGATTATCCCCTCACCCTGCAGTGGCTGCCCTCCCTGGAGTACCTCCTCCATCCTCCCTCCGTCTCTCTGCAGGAGAAGAACCGCTGGAGACAAGCCGGACTCGCTCCCGTCCTCTACATGCAGTCCCACTGTGACGTGCCCTCAGACCGAGACCGCTACGTCCAGGAGCTTATGAAGTATATAGAGGTGGACTCTTACGGGAAGTGTCTCAATAATAAGTCTCTACCTGAGCGTTTGGAGGACACCAGCACGGCTACAGGTGAGGAGAGGGAGTTTATGAGCTTTGTTGGACGCTACAAGTTCCACCTGGCGCTGGAGAACGGCCTGTGTCCTGATTATATGACGGAGAAGCTGTGGCGGCCCCTGCACCAGGGCTGCGTTCCCGTCTACAGGGGCTCGTCCTCGGTGTCCGACTGGCTTCCCAACGATCATTCGGCCGTTCTGATCGACAGCTTCTCCTCTCCTAAAGAACTCGCCGACTTCATCAGAGCTctggatgaggatgatgaggagTATCTGCACTACCTGGAGTTTAAAACCCCCAGTAAGATCACTAACCTGCGGCTCCTGGAGGGGCTCCAGAGCAGAGAGTGGGGCGTTAACGACATGAGCAAACCCAACTACCTGAACGGGTTCGAGTGTTTCGTCTGCGATCGGGAAAACGAGCGAATAGCAGCGCAGAAAGCTCACAGACGAAACCCAACCAAGTTCCCTAAACCACAGCCCAAAACCGCCAACAGCACCCACATGGGCTGCCCACTCCCCAGCCCTGGATACGGACACGCAGACGAGATCGACACCAATGATGGctggCTTCAGATGTGGCCGCAGGACTACTGGCAGAGTCTGGATCAGGCAGAGGGTCTGGAGTCTCTGATAAAACACAATGAGTCTGATCCAGGGCTGCTGTGGCACCACATTCACAGCATGGCTATGAAACGGAGCGGCGGCCAATAGCAGCAGGACGTAGCGGACCCTCTCCAAGGACGTATCGGACCCCGCGGTCGAACCACAGAGAGCTTTCACTGTGCCAAAGAACCTCAACTCAGGCCAAAACACCAGAACCCACTTCAGGTTCATCTCGCTGCTGGAGGAGAGCTGATCCTctacactgaaataaagataTTTACTGGGTTACAGTGAGCAGAGGATCTGCAGATATGGgtcaattacattaaattaaagacTTTTGTACACTTTTTTATACCACTTTGACACAATTAAGACcacttttataatatattataacaaaatgccaaaatataaacaacactAGTATTAAGTTTGCACACTTGGTGTGAAATGGTCctggttgt

Function

symbol description
fut11 Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi cisterna membrane and Golgi membrane. Predicted to be integral component of membrane. Orthologous to human FUT11 (fucosyltransferase 11).

NR:

description
alpha-(1,3)-fucosyltransferase 11

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0046920 alpha-(1->3)-fucosyltransferase activity molecular_function

KEGG:

id description
K11257 FUT11; galactoside 3-L-fucosyltransferase 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228432.2 True 1972 mRNA 0.54 4 18337692 18343003
XM_007228433.3 False 1930 mRNA 0.54 4 18337692 18342971
XM_007228434.3 False 1850 mRNA 0.54 4 18337692 18341997

Neighbor

gene id symbol gene type direction distance location
LOC103028142 cetn2,LOC108436166,LOC102228171 coding downstream 54793 18280633 ~ 18282899 (-)
LOC103044938 NA coding downstream 128806 18191791 ~ 18208886 (-)
slbp NA coding downstream 157170 18176707 ~ 18180522 (-)
ccdc142 NA coding downstream 161577 18165988 ~ 18176115 (-)
nkx1-1 nkx1-1,nkx1.2lb,LOC107550996,LOC107706723,LOC107679121 coding downstream 258210 18076055 ~ 18079482 (-)
LOC103044618 plp1,LOC107689137,LOC107554657,LOC103135636,LOC103135639,LOC108242072 coding upstream 13986 18356989 ~ 18370024 (-)
LOC103026001 NA coding upstream 36791 18379794 ~ 18385052 (-)
nlgn3 nlgn3,nlgn3a,LOC107689138,LOC107663109 coding upstream 81755 18424758 ~ 18636999 (-)
fgf16 fgf16,LOC107654780,LOC107731802,LOC107575101,LOC107746175 coding upstream 915595 19258598 ~ 19268334 (-)
LOC103038011 uprt,LOC108440089,LOC108443770 coding upstream 1007898 19350901 ~ 19359251 (-)
G206446 nsdhl non-coding downstream 34873 18288975 ~ 18302819 (-)
G206444 nsdhl non-coding downstream 51432 18283893 ~ 18286260 (-)
G206443 NA non-coding downstream 57562 18279811 ~ 18280130 (-)
G206435 acrc,LOC108268437,LOC102779592,LOC100690020 non-coding downstream 59151 18276257 ~ 18278541 (-)
G206434 NA non-coding downstream 63371 18270463 ~ 18274321 (-)
G206460 NA non-coding upstream 5752 18348755 ~ 18349791 (-)
G206457 NA non-coding upstream 8059 18351062 ~ 18353411 (-)
G206462 NA non-coding upstream 33034 18376037 ~ 18376238 (-)
G206466 NA non-coding upstream 57690 18400693 ~ 18400913 (-)
G206467 NA non-coding upstream 63533 18406536 ~ 18406745 (-)
LOC111195732 NA other downstream 295753 18039675 ~ 18041939 (-)
LOC103033759 NA other downstream 485501 17843966 ~ 17852191 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other downstream 1036699 17259786 ~ 17300993 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 1972045 16203937 ~ 16365647 (-)
G205670 NA other downstream 2505598 15831650 ~ 15832094 (-)
G206575 NA other upstream 495366 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 694691 19037694 ~ 19127726 (-)
LOC103046671 NA other upstream 1582028 19925031 ~ 19994802 (-)
LOC103046056 NA other upstream 1614474 19957477 ~ 19968031 (-)
LOC103040644 LOC108443111 other upstream 1764094 20107097 ~ 20274905 (-)

Expression


Co-expression Network