G50469


Basic Information

Item Value
gene id G50469
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 79280 ~ 79516 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU57427
CTTCAATGGTCTCCAAACGGTTGAAGGAACAGTTTTAGTGCAGATTCAAAGGGATTTAAACAATACCAGACGAGGAATAAGGGTCTTATCTAGCGAAACGATCAGTCATTTTCTAAAAAAAAAAAAAAATCAAAATGTATATGCTTTATAGGCACAAATGATCGCATCACAAGTGCTTCCACCAGAACGCGATTCCGTATTCTTCAAAAGCTTACGCTGAATGTCCTACGCCTTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57427 True 237 lncRNA 0.38 1 79280 79516

Neighbor

gene id symbol gene type direction distance location
CI01000009_00094836_00095813 NA coding downstream 14855 94371 ~ 97230 (+)
CI01000009_00179808_00221387 UGGT2 coding downstream 100292 179808 ~ 221387 (+)
CI01000009_00242093_00247335 FDX1 coding downstream 162445 241961 ~ 247343 (+)
CI01000009_00260081_00285692 RNF17 coding downstream 180390 259906 ~ 285711 (+)
CI01000009_00300778_00315275 NA coding downstream 221262 300778 ~ 315405 (+)
G50440 NA non-coding upstream 57682 21316 ~ 21598 (+)
G50473 NA non-coding downstream 18370 97886 ~ 99056 (+)
G50480 NA non-coding downstream 38047 117563 ~ 118000 (+)
G50508 NA non-coding downstream 96550 176066 ~ 222848 (+)
G50662 NA non-coding downstream 255523 335039 ~ 335961 (+)
G50920 NA other downstream 690325 769841 ~ 770233 (+)
CI01000009_01431700_01434463 NA other downstream 1343331 1429873 ~ 1435328 (+)
G51122 NA other downstream 1600630 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 1814719 1897343 ~ 1919516 (+)

Expression


Co-expression Network