G50473


Basic Information

Item Value
gene id G50473
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 97886 ~ 99056 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU57432
GCTTCTCTGCCCTCTAGTGGTTGAATCACAAAGAGAGAGACTATGGCACCTTTGAGATTTTTCCCACAGTGGACCCAACATGTATTTAAACGCCACACTTTCTGTAAAATACATATACAAGATACAAAATATAAAACCAAATGGCACCTGCAAACAAATAATGCCAGACCTTTGAACAGAACTAAAACTTCATGTGAAATGAACAAGCTTAGTCTTAGTCTTTCAGCCCTGGGTCAATATAATTATGCATTTTAGAGAAATATATACAGTATCTCACAGAAGTGAGTACACCCCTCACATTTTTGTAAATATATATTTTTTTATATCTTTTCATGTGACAACACTGAAGAAATGACACTTTGCTCCACCTTCCGTTTGAGGATTCCCCACAAATGCTCAATAGGGTTTAGGTCTGGAGACATGCTTTAGCAAGGCAGTGGTCATCTTGGAGGTGTGTTTGGGGTCGTTATCATGTTGGAATGCTGCCCTGCGGCCCAGTCTCTGAAGGGAGGGGATCATGCTCTGCTTCAATATGTCACAGTACATGTTAGCATTCATGGTTCCCTCAATAAATTGTAGCTCCCCAGTGCCAGCAGCACTCATGCAGCCCCAGACCATGCTTGACTGTAGGCAAGACACACTTGTCTTTGTACTCCTCACCTGGTTGCCGCGACACACGCTTGACACCATCTGAACCAAGTAAGTTTATCTTGGTCTCATCAGACCACAGGACATGATTCCAGTAATCCATGTCCTTAGTCTGCTTGTCTTCAGCAAACTGTTTGCGGGCTTTCTTGGCCACAGTGCTGCAGCTCAGTTTCAGGGTCTTGGCAATCTTCTTATAGCCTACGCCATCTTTATGTAGAGCAACAATTCTTTTCTTCAGATCCTCAGAGAGTTCTTTGCCATGAGGTGCCATGTTGAACTTCCAGTGACCAGTATGAGAGAGTGAGAGCGATAACACCAAATTTAACACACCTGCTCCCCATTCACACCTGAGACCTTGTAACACTAATGAGTCACATGACACCGGGGAGAGAAAATGGCTAATTGGGCCCAATTTGGACATTTTCACTTAGGGGTGTACCCACTTTTGTGGCC
>TU57431
GCTCAGTTTCAGGGTCTTGGCAATCTTCTTATAGCCTACGCCATCTTTATGTAGAGCAACAATTCTTTTCTTCAGATCCTCAGAGAGTTCTTTGCCATGAGGTGCCATGTTGAACTTCCAGTGACCAGTATGAGAGAGTGAGAGCGATAACACCAAATTTAACACACCTGCTCCCCATTCACACCTGAGACCTTGTAACACTAATGAGTCACATGACACCGGGGAGAGAAAATGGCTAATTGGGCCCAATTTGGACATTTTCACTTAGGGGTGTACCCACTTTTGTGGCCAGCGGTTTAGACATTAATGGCTGTGTGTTAAGTTATTTTGAGGGGACAGCAAATTTACACTGTTATACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57432 False 1101 lncRNA 0.38 1 97886 98986
TU57431 True 360 lncRNA 0.44 1 98697 99056

Neighbor

gene id symbol gene type direction distance location
CI01000009_00094836_00095813 NA coding upstream 1137 94371 ~ 97230 (+)
CI01000009_00179808_00221387 UGGT2 coding downstream 80752 179808 ~ 221387 (+)
CI01000009_00242093_00247335 FDX1 coding downstream 142905 241961 ~ 247343 (+)
CI01000009_00260081_00285692 RNF17 coding downstream 160850 259906 ~ 285711 (+)
CI01000009_00300778_00315275 NA coding downstream 201722 300778 ~ 315405 (+)
CI01000009_00318494_00322434 NA coding downstream 219200 318256 ~ 323055 (+)
G50469 NA non-coding upstream 18370 79280 ~ 79516 (+)
G50440 NA non-coding upstream 76288 21316 ~ 21598 (+)
G50480 NA non-coding downstream 18507 117563 ~ 118000 (+)
G50508 NA non-coding downstream 77010 176066 ~ 222848 (+)
G50662 NA non-coding downstream 235983 335039 ~ 335961 (+)
G50664 NA non-coding downstream 259422 358478 ~ 358706 (+)
G50666 NA non-coding downstream 281492 380548 ~ 380857 (+)
G50920 NA other downstream 670785 769841 ~ 770233 (+)
CI01000009_01431700_01434463 NA other downstream 1323791 1429873 ~ 1435328 (+)
G51122 NA other downstream 1581090 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 1795179 1897343 ~ 1919516 (+)
G51274 NA other downstream 2156043 2255099 ~ 2350486 (+)

Expression


Co-expression Network