ccdc69 (ccdc69)


Basic Information

Item Value
gene id ccdc69
gene name ccdc69
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 37392070 ~ 37407429 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007246443.3
TCACAACATCCAATCAAAGGAAGTTTAAAAGACCTGTTTTAAAGGACTGCCTGGTCTCAGCGCTGTCTTCTGTTTTGTAATTTGCTTTGTTTTCACCATGTGAAACTGAAAATCCCTTAGTCCGCTCGAGTTTCCGTGTTTCGGTAGGATACAGGTTAAAGACGGGCAGCGCGCGTTCCCGCCCCTCGGTAACAGTCAGCGGCGCTGCGGGTTCACAGACTTCAGGCTGTGAGTGTTTCAGGGCTTCAGTATCCTGAGCTGAAGATCTTCTCACACCACTTtcctgaaggagagagagagagagagggcaggaAGAAAGCATGGGCTGCCACCACAGCAAGCCGTGTCTCCACGCCTGTCAGAGGAAGCAGAAGaaaaacaaagcaaaatgtgAGACCCATCAAAAGGAGATCAGCGCTCAGGATGGAAGTGGAAAGCTCCCTCTGCAGGAGCTGAGCACCAGCCCAGAGAAGCTGCTGGAGAGTTATGAACAGCAGCTGAAAGTTCTGCATAAACTTTTGTCAGCTTCTGGTACAGAGCGGGAGCAGCTCCTGAAGGACCATCAGCACGGAGAGATCTGCACACTTGTCCACAGCATCACTGAGAAGGTGAAGAGCGAAGTTACGGCTGAGCTCGCTGCTCTTCACGAGAAGCAGGCAAAGATCTCCTCAGAGCAGCACCACAAAGAAACAGAAGAGATGCGTCGAGTACACAGTGAAGAGAAGCACGCATTAAAGGAGGCACACACAGCAGCTGAAGCCGCTCTGAAGGGGCAGATTGAAGAACTGACATCAGACTTGAAACTGTTCACCATGTTGAAACAGAGAGTGAAGGAGTCCACACTGAACAGGGACCTTCGGAGAAACATTGAGactcATGGCAGCCCTGGTGAATTCTGGGAGCAGGAGCAAGAGAGTCTGCTAATTGTCATAGAGATGAAGAGCGAGCGTTTACAGGAGCAGGGAAGCAAGCTGCGGCAGATGGAGGCGCTGGTTGAGAAGAACCTTTCTCTGGAGGACCAGGTTTTGCAGGTTCTACAGCAGAACGAGGACCTGAGAGTTCGGATAGAGAACTATCAAACACTAATACACCAACTTTCCAAGGAGCAGAATGAGACACAGGAGGCTCTGGAGAAGCAGACCCTGCAGATGCATAAACTCAATCAGGAAAAAGAGGAGCTGCTTTTTAAACTCCTCCACAGCCAGGACTCTCGCTCCTCGTTTCACATGCCGGCCCTTATTCCTGCGGAAGTGTCCCACAGCTAGCCTGACTGGCCTTCTCTCAGACTGGAGTGGACTTTACTCACCAAAGCCTTGCCATTGACTCCAGTGTTTTGTTACTTGTGCCTCAATTTTTACCTTGTTGCTGCTGTTGATTTCTATACAAGCAACTGTTTTCAAGAAGCAGTGGACATTACGCCTCGTCGAAACTGACTTACAGCATCCGTTTTACTGTCAGTCTTTGGAAAACTGATGTAAtggttgtatttgtattttacgttttggttttatttaattttattcaatgCTCTGATGCATTTTGGAATAGTCATAATATACCAATAATGCTGTATAGATATAATGGTAATCTGCTACTTTGCTGGTGATTTTAGGCCGGCTTGTTTATAGTCTTTAGCATTATGCATATGATGTTGTCAAATGACAGAGGTTCTCTTTATTTCCCCCCAAAGACAATCAgccatttttcctttttgccGTGCAACACTGTAGCAGGCAAAAGCACTTGTACGTGTAGTTTAAAAGCAATAgggatatttttttccagatgcaCTGGCACTTTTGCAGCAGTAtttttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatatatgtatgaatgAGGATGATTGTGGGACTTGTTGGTTTAGAACTGTATGTTTGCATGCTTACACCTTTGGATGTGTTCATGGAAGTGTCGTTTCTGAGCACATGGATCGTTCTGGTAGTTGAGACATGACTGGTGACTCACTGGAGTGGaatcagtgttttgttatttaGGCAAATATATGAATGTTTGCTGGGAGAGAACCTCATATATTAAGAAGTGTGAGTGCAGAGCAAGTTTGGACAGATGCTGGAGGACTCCTTTACTGGTCGTTGGTCAATGGTGCAGAACAATGTAGAGTAGTTAGTGCTCAAAATGGCTGTTTTTGTACTTCAATTGCATTTGAGTTTTTCtctgatttctttttctttctttcatactCGTGTTCCCATGTGCCTGTTCTGTTGTCCATTTTCTTACCTCTGAACCAGTCCTTGTTGCAATGGGCATCCCAAAGAAAGGTGAACCTCAATAAAACTGCATCTGTCCAATGTA

Function

symbol description
ccdc69 Predicted to enable microtubule binding activity. Predicted to be involved in spindle midzone assembly. Predicted to be located in spindle midzone. Predicted to be active in nucleus. Predicted to colocalize with cytoplasm. Orthologous to human CCDC69 (coiled-coil domain containing 69).

NR:

description
PREDICTED: coiled-coil domain-containing protein 69

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007246443.3 True 2341 mRNA 0.46 9 37392070 37407429

Neighbor

gene id symbol gene type direction distance location
LOC103038966 LOC108417621,LOC108268934,LOC107741049,LOC107662002,LOC107563594 coding downstream 106340 37280841 ~ 37285730 (-)
LOC103033714 si:dkeyp-110e4.11,LOC108416539,LOC107741102,LOC107664778,LOC107717397,LOC107598365,LOC108268417 coding downstream 173779 37206239 ~ 37218291 (-)
LOC111195788 NA coding downstream 285613 37100295 ~ 37106457 (-)
polr2g polr2gl,POLR2G,rpb7,polr2g,LOC106604162 coding downstream 305091 37083976 ~ 37086979 (-)
eef1g eef1g coding downstream 309864 37072586 ~ 37082206 (-)
gm2a gm2a coding upstream 7163 37414592 ~ 37421150 (-)
LOC103027906 LOC108416579,LOC108269025,LOC107662007,LOC107741056,LOC107664772,LOC107717388,LOC102314633 coding upstream 151265 37558694 ~ 37625939 (-)
glra1 glra1,LOC107717398,LOC107662012 coding upstream 286624 37694053 ~ 37776716 (-)
thoc3 thoc3,LOC107664783,LOC107662035,LOC107598370 coding upstream 636592 38044021 ~ 38048482 (-)
LOC103024433 si:dkey-280e21.3,LOC108417838,LOC108268502,LOC105913081,LOC107664720,LOC107741091 coding upstream 642809 38050238 ~ 38075468 (-)
G210242 NA non-coding downstream 68444 37323407 ~ 37323626 (-)
G210235 tmed9,LOC108416549,LOC107662005,LOC107664780,LOC107741051 non-coding downstream 77454 37309378 ~ 37314616 (-)
G210223 lman2 non-coding downstream 90268 37299114 ~ 37301802 (-)
G210197 NA non-coding downstream 163458 37228261 ~ 37228612 (-)
G210173 NA non-coding downstream 263865 37127694 ~ 37128205 (-)
G210306 NA non-coding upstream 178157 37585586 ~ 37586656 (-)
G210314 NA non-coding upstream 219410 37626839 ~ 37629906 (-)
G210317 NA non-coding upstream 224963 37632392 ~ 37632695 (-)
G210339 NA non-coding upstream 238763 37646192 ~ 37646869 (-)
G210347 g3bp1,LOC107683011 non-coding upstream 270027 37677456 ~ 37683502 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other downstream 187685 37165034 ~ 37204385 (-)
c24h12orf73 NA other downstream 581574 36809307 ~ 36810496 (-)
G210059 NA other downstream 681327 36710420 ~ 36710743 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other downstream 2632979 34709771 ~ 34759091 (-)
egf NA other downstream 2735586 34620461 ~ 34656484 (-)
LOC103035726 LOC103035726,LOC108416673,LOC108268898,LOC107730672,LOC107601515,LOC107550867,LOC107680594,LOC107756447 other upstream 2120204 39527633 ~ 39540816 (-)
bend4 bend4 other upstream 2206286 39613715 ~ 39632176 (-)
atp8a1 atp8a1 other upstream 2236115 39643544 ~ 39795943 (-)
LOC103023530 LOC103023530,LOC108418701 other upstream 2525687 39933116 ~ 39940055 (-)
G210991 LOC103042126,LOC108416825 other upstream 2953829 40361258 ~ 40363237 (-)

Expression


Co-expression Network