G50666


Basic Information

Item Value
gene id G50666
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 380548 ~ 380857 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU57662
CAAAGATTTTTAGAATAATAATCGATCTCAAGTCCATATAACGCAGGCGTATGGGGTCCATCAAAGTTGATGCTTCAAAAACCACACAAACTGATGGTAATCCATACGACCCCTGTTGATGAATCAATTAAAGGGTTAGTTCACCCAAAAATGAAATTTCTGTCATTAATTACTTACCCTCATGTCGTTACAAACCGTAAGACATTTCATCCGTAAGACATTCATCAAAAACATTGAGATGTTTTTGATGAAATCTGACAGGTTTGGTAGAAAGAACGTAGAAAGCAATGTAATTACCACAATCAAGGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57662 True 310 lncRNA 0.38 1 380548 380857

Neighbor

gene id symbol gene type direction distance location
CI01000009_00378726_00379550 NA coding upstream 744 378726 ~ 379804 (+)
CI01000009_00363403_00368182 RNASEH2B coding upstream 12332 363403 ~ 368216 (+)
CI01000009_00343750_00344964 TRIM13 coding upstream 35258 343750 ~ 345290 (+)
CI01000009_00326208_00333904 NA coding upstream 46247 326208 ~ 334301 (+)
CI01000009_00318494_00322434 NA coding upstream 57493 318256 ~ 323055 (+)
CI01000009_00541592_00545933 CMSS1 coding downstream 159912 540769 ~ 545997 (+)
CI01000009_00547369_00551459 NA coding downstream 166512 547369 ~ 552216 (+)
CI01000009_00603498_00605392 NA coding downstream 222371 603228 ~ 605392 (+)
CI01000009_00605366_00605964 COL8A1, COL8A1A coding downstream 224509 605366 ~ 606070 (+)
CI01000009_00608513_00609159 JAGN1, JAGN1A, JGN1A coding downstream 227656 608513 ~ 609375 (+)
G50664 NA non-coding upstream 21842 358478 ~ 358706 (+)
G50662 NA non-coding upstream 44587 335039 ~ 335961 (+)
G50508 NA non-coding upstream 157700 176066 ~ 222848 (+)
G50480 NA non-coding upstream 262548 117563 ~ 118000 (+)
G50473 NA non-coding upstream 281492 97886 ~ 99056 (+)
G50627 NA non-coding downstream 357 381214 ~ 385408 (+)
G50639 NA non-coding downstream 7341 388198 ~ 388652 (+)
G50633 NA non-coding downstream 7893 388750 ~ 389122 (+)
G50631 NA non-coding downstream 14518 395375 ~ 495961 (+)
G50719 NA non-coding downstream 123561 504418 ~ 504619 (+)
CI01000009_00094836_00095813 NA other upstream 284761 94371 ~ 97230 (+)
G50920 NA other downstream 388984 769841 ~ 770233 (+)
CI01000009_01431700_01434463 NA other downstream 1041990 1429873 ~ 1435328 (+)
G51122 NA other downstream 1299289 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 1513378 1897343 ~ 1919516 (+)
G51274 NA other downstream 1874242 2255099 ~ 2350486 (+)

Expression


Co-expression Network