Gene
RNA
| Item | Value |
|---|---|
| gene id | G50627 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 381214 ~ 385408 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU57615 | True | 531 | lncRNA | 0.45 | 2 | 381214 | 385408 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_00378726_00379550 | NA | coding | upstream | 1410 | 378726 ~ 379804 (+) |
| CI01000009_00363403_00368182 | RNASEH2B | coding | upstream | 12998 | 363403 ~ 368216 (+) |
| CI01000009_00343750_00344964 | TRIM13 | coding | upstream | 35924 | 343750 ~ 345290 (+) |
| CI01000009_00326208_00333904 | NA | coding | upstream | 46913 | 326208 ~ 334301 (+) |
| CI01000009_00318494_00322434 | NA | coding | upstream | 58159 | 318256 ~ 323055 (+) |
| CI01000009_00541592_00545933 | CMSS1 | coding | downstream | 155361 | 540769 ~ 545997 (+) |
| CI01000009_00547369_00551459 | NA | coding | downstream | 161961 | 547369 ~ 552216 (+) |
| CI01000009_00603498_00605392 | NA | coding | downstream | 217820 | 603228 ~ 605392 (+) |
| CI01000009_00605366_00605964 | COL8A1, COL8A1A | coding | downstream | 219958 | 605366 ~ 606070 (+) |
| CI01000009_00608513_00609159 | JAGN1, JAGN1A, JGN1A | coding | downstream | 223105 | 608513 ~ 609375 (+) |
| G50666 | NA | non-coding | upstream | 357 | 380548 ~ 380857 (+) |
| G50664 | NA | non-coding | upstream | 22508 | 358478 ~ 358706 (+) |
| G50662 | NA | non-coding | upstream | 45253 | 335039 ~ 335961 (+) |
| G50508 | NA | non-coding | upstream | 158366 | 176066 ~ 222848 (+) |
| G50480 | NA | non-coding | upstream | 263214 | 117563 ~ 118000 (+) |
| G50639 | NA | non-coding | downstream | 2790 | 388198 ~ 388652 (+) |
| G50633 | NA | non-coding | downstream | 3342 | 388750 ~ 389122 (+) |
| G50631 | NA | non-coding | downstream | 9967 | 395375 ~ 495961 (+) |
| G50719 | NA | non-coding | downstream | 119010 | 504418 ~ 504619 (+) |
| G50735 | NA | non-coding | downstream | 152763 | 538171 ~ 538511 (+) |
| CI01000009_00094836_00095813 | NA | other | upstream | 285427 | 94371 ~ 97230 (+) |
| G50920 | NA | other | downstream | 384433 | 769841 ~ 770233 (+) |
| CI01000009_01431700_01434463 | NA | other | downstream | 1037439 | 1429873 ~ 1435328 (+) |
| G51122 | NA | other | downstream | 1294738 | 1680146 ~ 1681966 (+) |
| CI01000009_01897343_01919208 | PIKFYVE | other | downstream | 1508827 | 1897343 ~ 1919516 (+) |
| G51274 | NA | other | downstream | 1869691 | 2255099 ~ 2350486 (+) |
