eef1g (eef1g)


Basic Information

Item Value
gene id eef1g
gene name eef1g
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 37072586 ~ 37082206 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015605100.2
GTATTTCTGCGACGTGCCCCCGGTATACGACAGCAGCGCGCGCCTCCGCTCCTTCTTTCTCTCGTCCTAAAGATGGCGGCAGGGACTCTCTACACATACGCAGAGAACTGGAGGGCCTACAAGGCTCAAATTGCAGCCCAGTACAGCGGGGCTCGTCTGAAGGTGGCGAGTTCCCCCCCTGCCTTCACCTTTGGGCAGACGAACCGCTCCCCTGCCTTCCTCAACAATTTTCCCTTGGGCAAGGTTCCAGCTTACCAGGGTGATGATGGCTTCTGTCTGTTCGAGAGCAACGCCATTGCTCACTACTTGAGCAATGATGCCCTCCGTGGCAGCACTCCTCAAGCCAGTGCCCAGGTTCTGCAGTGGGTCAGCTTTGCTGATTCTGAAATCATCCCTCCAGCTAGCGCTTGGGTCTTCCCAACCTTGGGCATCATGCAGTTCAACAAACAGGCCACAGAGCAGGCCAAGGAGGAGGTGAAGCGTGTGCTCACTGTCCTGAATCAGCACTTAAATACTCGTACTTTCTTGGTTGGCGAGAGAGTCAGCCTGGCTGATATCGCTGTGGCCTGCTCTCTGCTGTGGCTCTACAAGCAGGTTCTGGAGCCTGCTTTCCGCCAGCCCTACCCCAACGTCAATCGCTGGTTTGTGACCTGCATCAACCAACCTCAGTTCAAGGCTATTCTTGGGGAGGTCAAGCTGTGTGAGAAGATGGCTCAGTTTGATGCCAAGAAGTTTGCTGAGAGCCAGCCCAAGAAGGAGGCACCTGCCAAGAAGGAGAAAGGTGGCAAGGATGCTGGTAAGCCACAGCAACAgcaggagaaaaaagagaagaaaaaggaggagaagaaaccCGCTCCTGCTGCCGAGGAGATGGATGAGTGTGAGGCTGCTCTGGCTTCTGAGCCCAAAACCAAGGACCCGTTTGCTCACCTTCCAAAGAGTTCCTTTATTTTGGACGAGTTCAAGAGAAAGTACTCTAACGAGGACACACTGTCTGTGGCGCTCCCTTACTTCTGGGAAAACCTGGACCGCGAAGGCTACTCTATTTGGTATGGCGAGTACCGCTTCCCTGATGAACTGGCCATGACCTTCATGAGCTGTAATCTTATCACAGGAATGTTCCAGCGACTCGACAAACTGCGCAAGAATGCTTTCGCTAGCGTAATCCTCTTTGGCACAAACAACGCAAGTTCCATCTCTGGCATCTGGGTCTTCAGAGGCCAGGAGCTAGCTTTCCCTCTCTCTGAGGACTGGCAGATCGACTACGAGTCCTATAACTGGCGCAAACTGGATGTGGAAAGCGAGGAATGCAAGACTATGGTGAAGGAGTACTTTGCATGGGAGGGTGAATTCAAGCACGTAGGCAAACCTTTTAACCAGGGCAAGATCTTCAAGTGAGCATCAACGGCACTTACCAACAACTATCAACATCTAAATACAAGGACATGCGACCACTTTGTGTGAAAAAGGAACTTAAAACCCAAGTTGGAAGGGATTGTATGCTAAAATGGTATGAAGAGGTTTTGAGttgatgaaataaataaaaaaatgtttttcacagtC

Function

symbol description
eef1g Predicted to enable translation elongation factor activity. Predicted to be involved in translational elongation. Predicted to act upstream of or within glutathione metabolic process and translation. Predicted to be active in cytoplasm and nucleus. Orthologous to human EEF1G (eukaryotic translation elongation factor 1 gamma).

NR:

description
elongation factor 1-gamma isoform X2

GO:

id name namespace
GO:0006414 translational elongation biological_process
GO:0005853 eukaryotic translation elongation factor 1 complex cellular_component
GO:0003746 translation elongation factor activity molecular_function

KEGG:

id description
K03233 EEF1G; elongation factor 1-gamma

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015605100.2 True 1563 mRNA 0.51 10 37072586 37082206

Neighbor

gene id symbol gene type direction distance location
LOC103034997 NA coding downstream 33855 37003908 ~ 37038731 (-)
LOC103039285 klhl4,LOC107710306,LOC107563598,LOC103356419 coding downstream 68951 36951881 ~ 37003635 (-)
LOC103023303 NA coding downstream 235937 36827891 ~ 36836649 (-)
LOC103023613 NA coding downstream 244587 36822283 ~ 36827999 (-)
LOC103044642 nt5dc3,LOC108420239,LOC107716671,LOC107679628,LOC107590839,LOC107665729 coding downstream 268284 36793382 ~ 36804302 (-)
polr2g polr2gl,POLR2G,rpb7,polr2g,LOC106604162 coding upstream 1770 37083976 ~ 37086979 (-)
LOC111195788 NA coding upstream 18089 37100295 ~ 37106457 (-)
LOC103033714 si:dkeyp-110e4.11,LOC108416539,LOC107741102,LOC107664778,LOC107717397,LOC107598365,LOC108268417 coding upstream 124033 37206239 ~ 37218291 (-)
LOC103038966 LOC108417621,LOC108268934,LOC107741049,LOC107662002,LOC107563594 coding upstream 198635 37280841 ~ 37285730 (-)
ccdc69 ccdc69 coding upstream 309864 37392070 ~ 37407429 (-)
G210120 NA non-coding downstream 200642 36871579 ~ 36871944 (-)
G210107 tdg,LOC107574736,LOC107679604 non-coding downstream 250480 36815671 ~ 36822106 (-)
G210110 NA non-coding downstream 267134 36805131 ~ 36805452 (-)
G210076 armc10,LOC107753539,LOC107716641,LOC107665740,LOC107679576 non-coding downstream 301589 36769669 ~ 36770997 (-)
G210074 LOC107712756 non-coding downstream 305035 36765414 ~ 36767551 (-)
G210169 NA non-coding upstream 25494 37107700 ~ 37108089 (-)
G210173 NA non-coding upstream 45488 37127694 ~ 37128205 (-)
G210197 NA non-coding upstream 146055 37228261 ~ 37228612 (-)
G210223 lman2 non-coding upstream 216908 37299114 ~ 37301802 (-)
G210235 tmed9,LOC108416549,LOC107662005,LOC107664780,LOC107741051 non-coding upstream 227172 37309378 ~ 37314616 (-)
c24h12orf73 NA other downstream 262090 36809307 ~ 36810496 (-)
G210059 NA other downstream 361843 36710420 ~ 36710743 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other downstream 2313495 34709771 ~ 34759091 (-)
egf NA other downstream 2416102 34620461 ~ 34656484 (-)
G209660 NA other downstream 2797993 34234918 ~ 34274593 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other upstream 82828 37165034 ~ 37204385 (-)
LOC103035726 LOC103035726,LOC108416673,LOC108268898,LOC107730672,LOC107601515,LOC107550867,LOC107680594,LOC107756447 other upstream 2445427 39527633 ~ 39540816 (-)
bend4 bend4 other upstream 2531509 39613715 ~ 39632176 (-)
atp8a1 atp8a1 other upstream 2561338 39643544 ~ 39795943 (-)
LOC103023530 LOC103023530,LOC108418701 other upstream 2850910 39933116 ~ 39940055 (-)

Expression


Co-expression Network