LOC103044618 (plp1,LOC107689137,LOC107554657,LOC103135636,LOC103135639,LOC108242072)


Basic Information

Item Value
gene id LOC103044618
gene name plp1,LOC107689137,LOC107554657,LOC103135636,LOC103135639,LOC108242072
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 18356989 ~ 18370024 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022683708.1
CGGAGAGTTCAGTCTCAGAGCAGAGCTGAGATTAATAAAGCGCGCAGACTCAGCTGAACTAAATCAGACCACCTGCTGCAGTAATGGGTTGTTATGAGTGTTGTATGCGGTGTCTGGGGGGCGTGCCGTACGTGTCGGTGGTGGCGACGCTCCTCTGTTTCTCTGGAGTCGCTCTGTTCTGTGGATGTGGACACCAGGCTCTAACTGAGACCGAGAGACTCATAGAGAACTACTTCACTCGCAACTCACAGGATTACATCACCCTCGCCTaccttatcgAGTATTTCCAGTACATCATCTACGGCCTGGCCACCTTCTTCTTCCTGTACTGCATCGCTCTGCTGGCTGAGGGCTTTTACACCACCAGTGCGGCGCGGCAGACGTTCGGGGAGTTCAGGAGCACAGTGTGCGGCCGCTGCCTCAGCACATCCTTCATTGTGATCACGTATTTCCTGGCCGTGGTCTGGCTCCTGGTGTTCGCCCTGTCAGCGCTTCCCGTCTTCTTCTTCTACAACATGTCCAGCACCTGCCGCACCGTGGACGTCCTCTCCGAGACGCCCTCCAGCATCAACCAGCTGTGTGTGGACGCCCGGCAGTACGGTTTGCTTCCCTGGAACGCCATGCCGGGAAAAGCGTGTGGGATGACCCTGTCTAACGTCTGCAAAACAAGGGAGTTTTTCCTGACCTATGATCTCTACATCGCCGCCTTCGCCGGAGCCGGGATCACGCTGCTGGCCCTGctGACGTATGTGGTCTCCACTACCTATAATTTTGCGGTGTTGAGGTATCTGGGGAGGAAGGGTTTGGCTCCGCGGTGTTAAAACCTCCCCTCCTTAAATCCATGCTGTCCAGTCTGTTTCCACACGAGACACCTGAAGAAATCTGATCTCCTGCCTGTTCAGCAGCACTctctcatcttcatcttcatcttcatcatcatcatctcctcctcctcctcctcctccttcagccTGAGGAGCAATCTCTCCTTCATACTCTCTGCTCTCAGGCTGCAGTTCAGCTTTTTGCCCAGCAGGTGGTGCTGTAATTCTGAAGCCTGCGGGGCGAGTGGGGAACAATTTAACACATTTAGTTTTtctgctaaatatatataattttaactaTCTGAGCAaaatgtatttgattattttacattaaaactacCTGCAGATCTTGAGTACAGATTTTTATACTAGAAATAATTCTGCTGAAAGTCCTATAGggttaattttacatttctaatTACAAGTCTGAatgatagtaaataaaaaaaaagttctaattGATGCAAAACCcaattt

Function

symbol description
plp1 Enables identical protein binding activity. Involved in substantia nigra development. Located in plasma membrane. Implicated in Pelizaeus-Merzbacher disease and hereditary spastic paraplegia 2.

NR:

description
PREDICTED: myelin proteolipid protein isoform X1

GO:

id name namespace
GO:0042552 myelination biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022683708.1 True 1301 mRNA 0.50 7 18356989 18370024

Neighbor

gene id symbol gene type direction distance location
fut11 fut11,LOC107689135,LOC107710942,LOC107733430,LOC107663104 coding downstream 13986 18337692 ~ 18343003 (-)
LOC103028142 cetn2,LOC108436166,LOC102228171 coding downstream 74090 18280633 ~ 18282899 (-)
LOC103044938 NA coding downstream 148103 18191791 ~ 18208886 (-)
slbp NA coding downstream 176467 18176707 ~ 18180522 (-)
ccdc142 NA coding downstream 180874 18165988 ~ 18176115 (-)
LOC103026001 NA coding upstream 9770 18379794 ~ 18385052 (-)
nlgn3 nlgn3,nlgn3a,LOC107689138,LOC107663109 coding upstream 54734 18424758 ~ 18636999 (-)
fgf16 fgf16,LOC107654780,LOC107731802,LOC107575101,LOC107746175 coding upstream 888574 19258598 ~ 19268334 (-)
LOC103038011 uprt,LOC108440089,LOC108443770 coding upstream 980877 19350901 ~ 19359251 (-)
LOC103041563 LOC108440096,LOC103359160 coding upstream 1206473 19576497 ~ 19584235 (-)
G206457 NA non-coding downstream 3578 18351062 ~ 18353411 (-)
G206460 NA non-coding downstream 7198 18348755 ~ 18349791 (-)
G206446 nsdhl non-coding downstream 54170 18288975 ~ 18302819 (-)
G206444 nsdhl non-coding downstream 70729 18283893 ~ 18286260 (-)
G206443 NA non-coding downstream 76859 18279811 ~ 18280130 (-)
G206462 NA non-coding upstream 6013 18376037 ~ 18376238 (-)
G206466 NA non-coding upstream 30669 18400693 ~ 18400913 (-)
G206467 NA non-coding upstream 36512 18406536 ~ 18406745 (-)
G206569 NA non-coding upstream 436415 18806439 ~ 18806680 (-)
G206570 NA non-coding upstream 442962 18812986 ~ 18813304 (-)
LOC111195732 NA other downstream 315050 18039675 ~ 18041939 (-)
LOC103033759 NA other downstream 504798 17843966 ~ 17852191 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other downstream 1055996 17259786 ~ 17300993 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 1991342 16203937 ~ 16365647 (-)
G205670 NA other downstream 2524895 15831650 ~ 15832094 (-)
G206575 NA other upstream 468345 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 667670 19037694 ~ 19127726 (-)
LOC103046671 NA other upstream 1555007 19925031 ~ 19994802 (-)
LOC103046056 NA other upstream 1587453 19957477 ~ 19968031 (-)
LOC103040644 LOC108443111 other upstream 1737073 20107097 ~ 20274905 (-)

Expression


Co-expression Network