LOC103032567


Basic Information

Item Value
gene id LOC103032567
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 22036431 ~ 22042385 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022683777.1
AGTGGGAGGGTTTTCAGCAGCAGCATGATAACAAAACTCTTCATTTATGCAACAGAAGAGAGTGAGGAAGTGCTGCAGTCGCCATGCTGAGCTTTTGGATTCTAGTTTGGATTTGTGTCTGCTTCCTGTTCCTCCTAATTCGGACCCAGAGGCCCAAGAACTTCCCTCCCGGACCTCGGCCCGTCCCCCTATTTGGGAACCTGTTTCAGTTGAACATTACCAATCCTCTAAAAGACTTTGAGAGGTTGGCCGAGCGCTATGGGAATGTTTACAGTCTGTACATTGGAAGAAGACCAGCAGTGATTCTTACTGGTTTTAAAGCCGTTAAAGAAGCTCTGGTGACCAAGGCTGCAGACTTTTCTGGACGACCACAGAATCTCCTGGTCAGCGATGTAACAGAAGGGAAAGGTGTTATAATGGTTAACTATGGTCCTGCGTGGAAGGAGCATCGGCGATTCGCCCTCATGACTCTGAGGAACTTTGGCCTGGGGAAACAGTCTATGGAGGACAGGATTCTGAGAGAAACCAAACACATTGTTGCTCTCTTGGAGAAAAATGTTGGTGGATCCATCAACCCCCAGACCTTGTTCCATGATGCTGCCTCAAATATCATATACCtggttttatttggaattcgctTTGATTATGAGGATAACACCCACAGGGAGTTCATCCAGTGCTTCACTGAAAATGCAAAGATTGCCAATGGACCCTGGGGGATGATATATGACACACTGCCGATCGCCAGAGGCCTGCCCCTCCCTTTCAAGAAGGCTCTCAACAATGTtgagaaactgaaacatcttGCAACGCAGATGATTAACAAGCACAAGAAAACAAGAGTGCCAGGAGAGCCAAAAAACCTTGTTGACTGCTATCTGGATGAAATTGATAAGGCGACTGAAGGCTCTTCTTTTTCTGAGGCTCAGCTTTTGATGTATGCTCTAGAGCTGCACTTTGCTGGGACTGACACCACCTCCAACACTCTTCTGACAGCGTTCTTCTACCTCACAACACACCCTCACGTCCAAGaaaaatgtcaGCAGGAGATTGATGAGGTTTTGGAGGGTAAAGCCAGTGCATCTTATGAGGACAGACACAACATGCCGTACACCCAGGCTGTGATCCACGAGTCTCAGCGTATCGCTATCACTGTCCCCCTGAGTGTACCCCACTGCACCACCAGAGATACTGAAGTGATGGGCTACAGCATCCCAAAGGATACTCTCATCTTCCCAAACCTCGCATCAGTGCTGAGTGAGGAAGGCCAGTGGAAGTTTCCTCATGAGTTCAATCCAGCAAACTTCCTGAATGATCAGGGCCAGTTTGAGAAGCCTGAGGCCTTCCTGCCCTTTTCCGCTGGACCCCGTGTGTGTCTTGGTGAAGGTCTGGCTCGCATGGAGCTCTTCCTCATCTTGGTCACTCTGCTGCGTTGGTTCCAGTTCTTCTGGCCTGAAAATGCTGGAGAACCAGACTTCACTCCTGTGTATGGAATCACAGTCAGTCCCAAACCTTACAGGATGGGAATTAAGCTAAGAGAGCTAGCTAGAGAAATGTAGAACATTACTTTTGctcttattttgttattaagCGCATGTGTTATCAGCAGAAATTAGTTCCTAATTCATATTGATTTAAACTATGAAGTGTATGTTGGTCTTCCTTATTTGACTATTATTACTGCTATTAAACACTGAAATGCTATGTCATTTTATGTTGCTTTGCCATGAGCACTTTGGAGCACTTTCTCTCCCCTGAAGTAACATACTGCTatgccatgacttttggcatatcagtgtatatGCCCCAGGGAATGACCAGCAGCAGAGACGGTTTTCTCTGGAAGTGACCTGTATCCTAGAAAGATATGGCAGAAATATTCAGGTTAGGAGGGATGATTGAAACCAGAGAGTCAGACTTGAGAGAATGTCTATGTGCCATCTAACATGTTTTATACAGGTTTCaattaatatttgtatattttataatgtaattaaatattttcacacaaacaaa

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022683777.1 True 2016 mRNA 0.45 9 22036431 22042385

Neighbor

gene id symbol gene type direction distance location
LOC103037493 NA coding downstream 60257 21962543 ~ 21976174 (-)
LOC103036162 zc4h2,LOC103036162,LOC108436709,LOC108269407 coding downstream 406384 21623244 ~ 21630047 (-)
LOC103036462 LOC108436702,LOC105906303,LOC106604272 coding downstream 419143 21612833 ~ 21617288 (-)
LOC103037071 arhgef9,LOC108436700,LOC108269078 coding downstream 436712 21530760 ~ 21599719 (-)
tenm1 tenm1,LOC105906218 coding downstream 680794 20980755 ~ 21355637 (-)
cnot1 cnot1 coding upstream 10839 22053224 ~ 22076039 (-)
kdm7a kdm7ab,LOC108442737 coding upstream 40156 22082541 ~ 22120137 (-)
LOC103030564 NA coding upstream 347371 22389756 ~ 22392072 (-)
fgf6 fgf6,LOC107575219,LOC107656433,LOC107725939,LOC107658909,LOC107583988 coding upstream 351655 22394040 ~ 22400515 (-)
LOC103030249 zgc:77158,LOC108442730,LOC107572640,LOC107732819,LOC107575189,LOC107700881,LOC107686625 coding upstream 365007 22407392 ~ 22452031 (-)
G207243 NA non-coding downstream 1784 22016600 ~ 22034647 (-)
G207242 NA non-coding downstream 23718 22000241 ~ 22012713 (-)
G207232 NA non-coding downstream 87803 21946829 ~ 21948628 (-)
G207218 NA non-coding downstream 220781 21815266 ~ 21815650 (-)
G207068 NA non-coding downstream 348756 21686432 ~ 21687675 (-)
G207269 NA non-coding upstream 284517 22326902 ~ 22376687 (-)
G207275 NA non-coding upstream 334735 22377120 ~ 22377638 (-)
G207282 NA non-coding upstream 359988 22402373 ~ 22402783 (-)
G207272 NA non-coding upstream 361895 22404280 ~ 22406529 (-)
G207315 NA non-coding upstream 540381 22582766 ~ 22583801 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other downstream 53701 21979799 ~ 21982730 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other downstream 1253447 20677453 ~ 20782984 (-)
LOC103040850 hmgn5 other downstream 1524144 20463703 ~ 20512287 (-)
LOC103040644 LOC108443111 other downstream 1761526 20107097 ~ 20274905 (-)
LOC103046671 NA other downstream 2041629 19925031 ~ 19994802 (-)
LOC103035944 mical3 other upstream 843047 22885432 ~ 22956024 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other upstream 1178084 23220469 ~ 23412954 (-)
dnajc24 dnajc24 other upstream 1896540 23938925 ~ 24020314 (-)
G207707 polr2c other upstream 2482349 24524734 ~ 24529067 (-)
G207772 NA other upstream 2905746 24948131 ~ 24948851 (-)

Expression


Co-expression Network