LOC103030249 (zgc:77158,LOC108442730,LOC107572640,LOC107732819,LOC107575189,LOC107700881,LOC107686625)


Basic Information

Item Value
gene id LOC103030249
gene name zgc:77158,LOC108442730,LOC107572640,LOC107732819,LOC107575189,LOC107700881,LOC107686625
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 22407392 ~ 22452031 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022683779.1
AAAGAGAGAGGATGGACTGAGCGGAGGAGCAGGTTGTCACTCTGAGAGGAGTAGCTGGAGGGAGAGCAGCGCTGCTGGGGGATTAAAACTGCTTCTGAAGTTAAACTGatTCAGAATGCTGAACACACGATGGATGCTCTGGTTTATCTGAGGTTGCTGCGAGCCTGCGACCCCCCAGCTCTCCCCCACCACCCACGCCCTCCTCGCTCCAGGGCGTCTGACCCAACGGCGTCTGGCTCCTGGCGAACAGAGTAGAGCTCTTCTCCACACTCACAGGTGAAAGGTGACCCCCCCTGTGGAAGTATGCCTGGATGGAGGTCTCAGTGGCGTCTGGTGCTGCTCAACCTGCTGACCTGTGGCCTGGAGATCTGCGTTGCAGCCGGAATCACCTATGTGCCCCCACTGCTGCTGGAGGCCGGCGTGGAGGAAAAGTACATGACCATGGTGCTGGGTATTGGTCCTGTCCTGGGTCTCCTTTTCATCCCTCTCATTGGCTCGGCCAGTGACCACTGTAACAGCAGCTATGGCCGCCGTCGTCCCTTCATCTGGCTGCTGTCTCTGGGCGTTCTCCTCGCTCTGCTTATCATTCCCCACGCTGATGTTTTGGCGTCCCACCTCAGCTGGGGCACTGGCCTCCCCATCCAGGCTCTCCAGGTGGGGCTGCTTATCCTGGGCGTGGGGCTGCTGGACTTTTGTGGTCAGGTGTGCTTCACACCGCTGGAGGCTCTGCTGTCTGATCTGTATCGAGAGCGAGAGGACTGCGCTCAGGCCTTCGCCATGTTCTCGTTCATGGTGAGTCTCGGCGGCTGTGTGGGCTACCTGCTGCCCGCGCTGGACTGGAGCGGCGGCCTCCTGGCCTATTATCTGGGAGGACAGGCCGAGTGTCTCTTCAgcctcctcatcctcatcttcatcatcagcGTGCTGGTCACCATGAAGGTGTCGGAGGAGCACTCGTGCAGGCCGCTGGTTCTGGAGCCCGGGCCGGTGGAAACCGGGCAGTGCGGTCCGCGCTCCTGCTGCTACGTGCTACAGTGTAAACTCAGGCTGCTGAAGTCTGGACCTCTGCTGTGCTTGCTCAGGACTTGCTGGTCCATGACCCCGGCCATCTACAGGAGTTACTGCCACATCCCACGGGTCATGAAGCAGCTGTGTGTGGCACAGCTGTGCAGCTGGATGGCCGTCATGTCCTTCATGCTCTTCTATACGGACTTTGTGGGAGAGGGACTGTATGAAGGAGTGCCCAGTGCTGCCCCGGGCACTGTGCTCAGACAGAGATATGATGAAGGCATCCGAATGGGCAGTCTGGGACTGTTCCTGCAATGTGCTACCTCAACCTTCTTCTCGCTGGTCATGAGCCGTCTGGTGCGCGTGTTTGGCTCCAGGAAGATCTACCTGAGCAGCATGGTGTCCTTCACAGCTTCTGCATTGGTCATCTGTCTGTCCAAGAGTGTGCTGCTGGTCACGGCCATGTCTGCCCTCACTGGGTTCGCCTACGCCACCCTACAGACTCTGCCATACACCCTTACCTGCCACTACcacaaagagaaagagGTATACATGCAAATCAGCAAAACCAAAAAGACGCACAGAAGTGAGATGAGCTCCTCTCATGAAGCTGTATGTCTCACAGTGGATGATGACACGGGTGATCTGAACCACAAGAGTGGTCATACGAATGGTCATGCCTACTTCAAGCAGGAACATTACCCCTCTCAGCACAGTCAGAATGGTGCTCCTGCTGGTCTGGGGTCAGACGATTTTGAAAAACGAGGCGTCGGCTTGGATTTTGCCATTCTGGACAGCACCTTTCTGCTCTCTCAGGTCTTCCCCACTCTCTTCATGGGCATGATTGTCCAGTTCACACAGTCCGTCACTGCCTACGTTGCCTTTTCTGCCATTTTTGGTGCAATCGGTGTCTATTTTGCCACAGATATAATCTTCGACCAAAAGGATCTTAAATCCTGAGAGATCCTTAAATCCATCAGAGGGAGATTGCACTGGGCTTCCAGGAAACTGAAAGTGGaatggacctgtttttcctctgTCTGCAGTTCAAACCCACAAAAGAGAATTATCCTTCATCATCACACCATAGTCAAATTAGGCAAAATCTCTTGCTGCATTGTTTTCTCTGTTTAGTTAATTGCTTTCATTTTCTCAGATGCATGTTTCCTTATGTTTCCTTATTCTTGAACTCTTCATCTTGGGATAACCTACACAATATGAGCTCAGTAGGCCGAGGAAAGCAGGCCCAGATGGCGTCACagtgctctggaaaaaatgccTAGCACTCATCAAGTTCACTCCATTCTGATcaggttgattttttttttctgtcatagTTTATTTTTCATCACATTTACGTACAAATTATGCATTGTGCAAGCAGACCCACTTCACCAACATGAGTGAATGAAACTCGGACCAAGGGACGCATCAGTCAGATGTGATGTGCTATGACGCGAATGCATTTTATGTTGTGTAAAGAAAGATTTAGAAAGTaactattttattgtgtatatttttgtatattgataatatatataaatatatttatatcccTATGGGAATTGTTTTATGCAACCTGCTTAGTGAGGTCATGtgtatttatgttaaaaaaaaaaaacattgttttttgaaTGAACTgcatttgtgtttatgtggtttgAGTAAGCAGCGCTAATATCCAAATACAGacagaatctaaaaaaaaagacaatctaGATTATTTTTATACAGAGATCTGAATTAAACTACTCTTTACACTGTAGAATCACTTTGTGCCCCAAGTGATCATAAACGTGTATGAAGTGACTATAGACGGATGTGGATGTGAATTTGTAGAAAGATGTCCAATCATTTTTACAATAGAGGGTACGCAAAAAAATGTCACAATTGGGGGGAGGAGTCACTGCAGACACGCCCACCGAGAGGCACACCAGCTTTCAGTGTGaattctattaaaataattgcTGCAATTCTTAGAACTAACTGGAATCCAGGCACTGAAACATGTTCACTTTTAGGTTTTACTCAATCCAGGTCTTGGGATACAACTGTCCTGCTTATTTTAGTGTGTCCTGCTGGATCACTATCAAAGGATCAGGTACCACTTTAAGGAtcaggtaccactttaaaataacactc
>XM_022683780.1
agagagagagagagagagagagagagcgctacAGCTACCCGCCATTGCTCTCCTGTATTTATGTAGCCCTCAGAGCGGCTCGTGTGGAGGTTTGCAGGGATTCAGGGCTTCCTGGAGCTCCGGACTCGTGAAGAATGTatTCAGAATGCTGAACACACGATGGATGCTCTGGTTTATCTGAGGTTGCTGCGAGCCTGCGACCCCCCAGCTCTCCCCCACCACCCACGCCCTCCTCGCTCCAGGGCGTCTGACCCAACGGCGTCTGGCTCCTGGCGAACAGAGTAGAGCTCTTCTCCACACTCACAGGTGAAAGGTGACCCCCCCTGTGGAAGTATGCCTGGATGGAGGTCTCAGTGGCGTCTGGTGCTGCTCAACCTGCTGACCTGTGGCCTGGAGATCTGCGTTGCAGCCGGAATCACCTATGTGCCCCCACTGCTGCTGGAGGCCGGCGTGGAGGAAAAGTACATGACCATGGTGCTGGGTATTGGTCCTGTCCTGGGTCTCCTTTTCATCCCTCTCATTGGCTCGGCCAGTGACCACTGTAACAGCAGCTATGGCCGCCGTCGTCCCTTCATCTGGCTGCTGTCTCTGGGCGTTCTCCTCGCTCTGCTTATCATTCCCCACGCTGATGTTTTGGCGTCCCACCTCAGCTGGGGCACTGGCCTCCCCATCCAGGCTCTCCAGGTGGGGCTGCTTATCCTGGGCGTGGGGCTGCTGGACTTTTGTGGTCAGGTGTGCTTCACACCGCTGGAGGCTCTGCTGTCTGATCTGTATCGAGAGCGAGAGGACTGCGCTCAGGCCTTCGCCATGTTCTCGTTCATGGTGAGTCTCGGCGGCTGTGTGGGCTACCTGCTGCCCGCGCTGGACTGGAGCGGCGGCCTCCTGGCCTATTATCTGGGAGGACAGGCCGAGTGTCTCTTCAgcctcctcatcctcatcttcatcatcagcGTGCTGGTCACCATGAAGGTGTCGGAGGAGCACTCGTGCAGGCCGCTGGTTCTGGAGCCCGGGCCGGTGGAAACCGGGCAGTGCGGTCCGCGCTCCTGCTGCTACGTGCTACAGTGTAAACTCAGGCTGCTGAAGTCTGGACCTCTGCTGTGCTTGCTCAGGACTTGCTGGTCCATGACCCCGGCCATCTACAGGAGTTACTGCCACATCCCACGGGTCATGAAGCAGCTGTGTGTGGCACAGCTGTGCAGCTGGATGGCCGTCATGTCCTTCATGCTCTTCTATACGGACTTTGTGGGAGAGGGACTGTATGAAGGAGTGCCCAGTGCTGCCCCGGGCACTGTGCTCAGACAGAGATATGATGAAGGCATCCGAATGGGCAGTCTGGGACTGTTCCTGCAATGTGCTACCTCAACCTTCTTCTCGCTGGTCATGAGCCGTCTGGTGCGCGTGTTTGGCTCCAGGAAGATCTACCTGAGCAGCATGGTGTCCTTCACAGCTTCTGCATTGGTCATCTGTCTGTCCAAGAGTGTGCTGCTGGTCACGGCCATGTCTGCCCTCACTGGGTTCGCCTACGCCACCCTACAGACTCTGCCATACACCCTTACCTGCCACTACcacaaagagaaagagGTATACATGCAAATCAGCAAAACCAAAAAGACGCACAGAAGTGAGATGAGCTCCTCTCATGAAGCTGTATGTCTCACAGTGGATGATGACACGGGTGATCTGAACCACAAGAGTGGTCATACGAATGGTCATGCCTACTTCAAGCAGGAACATTACCCCTCTCAGCACAGTCAGAATGGTGCTCCTGCTGGTCTGGGGTCAGACGATTTTGAAAAACGAGGCGTCGGCTTGGATTTTGCCATTCTGGACAGCACCTTTCTGCTCTCTCAGGTCTTCCCCACTCTCTTCATGGGCATGATTGTCCAGTTCACACAGTCCGTCACTGCCTACGTTGCCTTTTCTGCCATTTTTGGTGCAATCGGTGTCTATTTTGCCACAGATATAATCTTCGACCAAAAGGATCTTAAATCCTGAGAGATCCTTAAATCCATCAGAGGGAGATTGCACTGGGCTTCCAGGAAACTGAAAGTGGaatggacctgtttttcctctgTCTGCAGTTCAAACCCACAAAAGAGAATTATCCTTCATCATCACACCATAGTCAAATTAGGCAAAATCTCTTGCTGCATTGTTTTCTCTGTTTAGTTAATTGCTTTCATTTTCTCAGATGCATGTTTCCTTATGTTTCCTTATTCTTGAACTCTTCATCTTGGGATAACCTACACAATATGAGCTCAGTAGGCCGAGGAAAGCAGGCCCAGATGGCGTCACagtgctctggaaaaaatgccTAGCACTCATCAAGTTCACTCCATTCTGATcaggttgattttttttttctgtcatagTTTATTTTTCATCACATTTACGTACAAATTATGCATTGTGCAAGCAGACCCACTTCACCAACATGAGTGAATGAAACTCGGACCAAGGGACGCATCAGTCAGATGTGATGTGCTATGACGCGAATGCATTTTATGTTGTGTAAAGAAAGATTTAGAAAGTaactattttattgtgtatatttttgtatattgataatatatataaatatatttatatcccTATGGGAATTGTTTTATGCAACCTGCTTAGTGAGGTCATGtgtatttatgttaaaaaaaaaaaacattgttttttgaaTGAACTgcatttgtgtttatgtggtttgAGTAAGCAGCGCTAATATCCAAATACAGacagaatctaaaaaaaaagacaatctaGATTATTTTTATACAGAGATCTGAATTAAACTACTCTTTACACTGTAGAATCACTTTGTGCCCCAAGTGATCATAAACGTGTATGAAGTGACTATAGACGGATGTGGATGTGAATTTGTAGAAAGATGTCCAATCATTTTTACAATAGAGGGTACGCAAAAAAATGTCACAATTGGGGGGAGGAGTCACTGCAGACACGCCCACCGAGAGGCACACCAGCTTTCAGTGTGaattctattaaaataattgcTGCAATTCTTAGAACTAACTGGAATCCAGGCACTGAAACATGTTCACTTTTAGGTTTTACTCAATCCAGGTCTTGGGATACAACTGTCCTGCTTATTTTAGTGTGTCCTGCTGGATCACTATCAAAGGATCAGGTACCACTTTAAGGAtcaggtaccactttaaaataacactc
>XM_022683781.1
agagagagagagagagagagagagagcgctacAGCTACCCGCCATTGCTCTCCTGTATTTATGTAGCCCTCAGAGCGGCTCGTGTGGAGGTTTGCAGGGATTCAGGGCTTCCTGGAGCTCCGGACTCGTGAAGAATGTGTGAatTCAGAATGCTGAACACACGATGGATGCTCTGGTTTATCTGAGGTTGCTGCGAGCCTGCGACCCCCCAGCTCTCCCCCACCACCCACGCCCTCCTCGCTCCAGGGCGTCTGACCCAACGGCGTCTGGCTCCTGGCGAACAGAGTAGAGCTCTTCTCCACACTCACAGGTGAAAGGTGACCCCCCCTGTGGAAGTATGCCTGGATGGAGGTCTCAGTGGCGTCTGGTGCTGCTCAACCTGCTGACCTGTGGCCTGGAGATCTGCGTTGCAGCCGGAATCACCTATGTGCCCCCACTGCTGCTGGAGGCCGGCGTGGAGGAAAAGTACATGACCATGGTGCTGGGTATTGGTCCTGTCCTGGGTCTCCTTTTCATCCCTCTCATTGGCTCGGCCAGTGACCACTGTAACAGCAGCTATGGCCGCCGTCGTCCCTTCATCTGGCTGCTGTCTCTGGGCGTTCTCCTCGCTCTGCTTATCATTCCCCACGCTGATGTTTTGGCGTCCCACCTCAGCTGGGGCACTGGCCTCCCCATCCAGGCTCTCCAGGTGGGGCTGCTTATCCTGGGCGTGGGGCTGCTGGACTTTTGTGGTCAGGTGTGCTTCACACCGCTGGAGGCTCTGCTGTCTGATCTGTATCGAGAGCGAGAGGACTGCGCTCAGGCCTTCGCCATGTTCTCGTTCATGGTGAGTCTCGGCGGCTGTGTGGGCTACCTGCTGCCCGCGCTGGACTGGAGCGGCGGCCTCCTGGCCTATTATCTGGGAGGACAGGCCGAGTGTCTCTTCAgcctcctcatcctcatcttcatcatcagcGTGCTGGTCACCATGAAGGTGTCGGAGGAGCACTCGTGCAGGCCGCTGGTTCTGGAGCCCGGGCCGGTGGAAACCGGGCAGTGCGGTCCGCGCTCCTGCTGCTACGTGCTACAGTGTAAACTCAGGCTGCTGAAGTCTGGACCTCTGCTGTGCTTGCTCAGGACTTGCTGGTCCATGACCCCGGCCATCTACAGGAGTTACTGCCACATCCCACGGGTCATGAAGCAGCTGTGTGTGGCACAGCTGTGCAGCTGGATGGCCGTCATGTCCTTCATGCTCTTCTATACGGACTTTGTGGGAGAGGGACTGTATGAAGGAGTGCCCAGTGCTGCCCCGGGCACTGTGCTCAGACAGAGATATGATGAAGGCATCCGAATGGGCAGTCTGGGACTGTTCCTGCAATGTGCTACCTCAACCTTCTTCTCGCTGGTCATGAGCCGTCTGGTGCGCGTGTTTGGCTCCAGGAAGATCTACCTGAGCAGCATGGTGTCCTTCACAGCTTCTGCATTGGTCATCTGTCTGTCCAAGAGTGTGCTGCTGGTCACGGCCATGTCTGCCCTCACTGGGTTCGCCTACGCCACCCTACAGACTCTGCCATACACCCTTACCTGCCACTACcacaaagagaaagagGTATACATGCAAATCAGCAAAACCAAAAAGACGCACAGAAGTGAGATGAGCTCCTCTCATGAAGCTGTATGTCTCACAGTGGATGATGACACGGGTGATCTGAACCACAAGAGTGGTCATACGAATGGTCATGCCTACTTCAAGCAGGAACATTACCCCTCTCAGCACAGTCAGAATGGTGCTCCTGCTGGTCTGGGGTCAGACGATTTTGAAAAACGAGGCGTCGGCTTGGATTTTGCCATTCTGGACAGCACCTTTCTGCTCTCTCAGGTCTTCCCCACTCTCTTCATGGGCATGATTGTCCAGTTCACACAGTCCGTCACTGCCTACGTTGCCTTTTCTGCCATTTTTGGTGCAATCGGTGTCTATTTTGCCACAGATATAATCTTCGACCAAAAGGATCTTAAATCCTGAGAGATCCTTAAATCCATCAGAGGGAGATTGCACTGGGCTTCCAGGAAACTGAAAGTGGaatggacctgtttttcctctgTCTGCAGTTCAAACCCACAAAAGAGAATTATCCTTCATCATCACACCATAGTCAAATTAGGCAAAATCTCTTGCTGCATTGTTTTCTCTGTTTAGTTAATTGCTTTCATTTTCTCAGATGCATGTTTCCTTATGTTTCCTTATTCTTGAACTCTTCATCTTGGGATAACCTACACAATATGAGCTCAGTAGGCCGAGGAAAGCAGGCCCAGATGGCGTCACagtgctctggaaaaaatgccTAGCACTCATCAAGTTCACTCCATTCTGATcaggttgattttttttttctgtcatagTTTATTTTTCATCACATTTACGTACAAATTATGCATTGTGCAAGCAGACCCACTTCACCAACATGAGTGAATGAAACTCGGACCAAGGGACGCATCAGTCAGATGTGATGTGCTATGACGCGAATGCATTTTATGTTGTGTAAAGAAAGATTTAGAAAGTaactattttattgtgtatatttttgtatattgataatatatataaatatatttatatcccTATGGGAATTGTTTTATGCAACCTGCTTAGTGAGGTCATGtgtatttatgttaaaaaaaaaaaacattgttttttgaaTGAACTgcatttgtgtttatgtggtttgAGTAAGCAGCGCTAATATCCAAATACAGacagaatctaaaaaaaaagacaatctaGATTATTTTTATACAGAGATCTGAATTAAACTACTCTTTACACTGTAGAATCACTTTGTGCCCCAAGTGATCATAAACGTGTATGAAGTGACTATAGACGGATGTGGATGTGAATTTGTAGAAAGATGTCCAATCATTTTTACAATAGAGGGTACGCAAAAAAATGTCACAATTGGGGGGAGGAGTCACTGCAGACACGCCCACCGAGAGGCACACCAGCTTTCAGTGTGaattctattaaaataattgcTGCAATTCTTAGAACTAACTGGAATCCAGGCACTGAAACATGTTCACTTTTAGGTTTTACTCAATCCAGGTCTTGGGATACAACTGTCCTGCTTATTTTAGTGTGTCCTGCTGGATCACTATCAAAGGATCAGGTACCACTTTAAGGAtcaggtaccactttaaaataacactc

Function

symbol description
zgc:77158 Predicted to enable sucrose:proton symporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human SLC45A3 (solute carrier family 45 member 3).

NR:

description
PREDICTED: solute carrier family 45 member 3-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15379 SLC45A3; solute carrier family 45, member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022683779.1 False 3150 mRNA 0.49 5 22407392 22435146
XM_022683780.1 False 3180 mRNA 0.49 5 22407392 22452031
XM_022683781.1 True 3184 mRNA 0.49 5 22407392 22452031

Neighbor

gene id symbol gene type direction distance location
fgf6 fgf6,LOC107575219,LOC107656433,LOC107725939,LOC107658909,LOC107583988 coding downstream 6877 22394040 ~ 22400515 (-)
LOC103030564 NA coding downstream 15320 22389756 ~ 22392072 (-)
kdm7a kdm7ab,LOC108442737 coding downstream 287255 22082541 ~ 22120137 (-)
cnot1 cnot1 coding downstream 331353 22053224 ~ 22076039 (-)
LOC103032567 NA coding downstream 365007 22036431 ~ 22042385 (-)
c24h12orf4 cunh12orf4,c8h12orf4,LOC107707474,LOC107700900,LOC107732788 coding upstream 8015 22460046 ~ 22477263 (-)
LOC103027701 cecr1 coding upstream 139001 22591032 ~ 22601463 (-)
LOC103027200 NA coding upstream 150595 22602626 ~ 22646944 (-)
LOC103026420 atp6v1e1,LOC107707480,LOC107701013,LOC108269194,LOC107575294,LOC107732807,LOC108442797,LOC102197685 coding upstream 224337 22676368 ~ 22683096 (-)
LOC103024959 NA coding upstream 329595 22781626 ~ 22789752 (-)
G207272 NA non-coding downstream 863 22404280 ~ 22406529 (-)
G207282 NA non-coding downstream 4609 22402373 ~ 22402783 (-)
G207275 NA non-coding downstream 29754 22377120 ~ 22377638 (-)
G207269 NA non-coding downstream 30705 22326902 ~ 22376687 (-)
G207243 NA non-coding downstream 372745 22016600 ~ 22034647 (-)
G207315 NA non-coding upstream 130735 22582766 ~ 22583801 (-)
G207333 NA non-coding upstream 236709 22688740 ~ 22689592 (-)
G207505 LOC108441495 non-coding upstream 255403 22707434 ~ 22709445 (-)
G207506 NA non-coding upstream 259846 22711877 ~ 22735025 (-)
G207511 NA non-coding upstream 291907 22743938 ~ 22745827 (-)
LOC103034681 LOC108436714 other downstream 160279 21764104 ~ 22247113 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other downstream 424662 21979799 ~ 21982730 (-)
LOC103039395 rps6ka6,rps6kal,LOC107572332,LOC107674878,LOC102207076 other downstream 1624408 20677453 ~ 20782984 (-)
LOC103040850 hmgn5 other downstream 1895105 20463703 ~ 20512287 (-)
LOC103040644 LOC108443111 other downstream 2132487 20107097 ~ 20274905 (-)
LOC103035944 mical3 other upstream 433401 22885432 ~ 22956024 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other upstream 768438 23220469 ~ 23412954 (-)
dnajc24 dnajc24 other upstream 1486894 23938925 ~ 24020314 (-)
G207707 polr2c other upstream 2072703 24524734 ~ 24529067 (-)
G207772 NA other upstream 2496100 24948131 ~ 24948851 (-)

Expression


Co-expression Network