LOC103038966 (LOC108417621,LOC108268934,LOC107741049,LOC107662002,LOC107563594)


Basic Information

Item Value
gene id LOC103038966
gene name LOC108417621,LOC108268934,LOC107741049,LOC107662002,LOC107563594
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 37280841 ~ 37285730 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684050.1
ATATTCCGCTTCGCTCTCAGTTGAGCCGCAGACTGGAGGAGGAACTGAAGTGTACACAGTGGCAGCTGActgatatttaaattattaccAGGATAAGATAAGGTTGGAATACTTTCACAGACAGCTGGGCTTCGTTTTTGATACTGacagctttctttttttttactcttcttGTGTTGACAGTTTTAATGTAGGTAAACACATGATGTGTGCCTGGAGCTGTTTTTATACTCATTAGCTAGATTATAGCTAGGAGATGACTTATTCACTGTCAGAAAAACAGCAAGAATTTCAGGGTTTTAAGTTTACTATGTgttttacaatatataattcCTCTCCTGATTAGCCCGGATCAACAGTATTTATTGATTATCTAAGGGACGAAACCTGCATAGCTGCACGTCTTGAAGATTTATCTCGGactccctgtttttttttttttaccacaggcAGAGCTAGATCAgatatttaaccccttaacaggccaggatttttgtcagttgtctgcctgacattacaccactaaatcttgagggcTTTGACATTTTAAGGGGATAAACAAAGGGACTAACTATCAGCTAAACCAAATATTGAGTGTAGGTTTccattctttttgtattttttctctttttttaactccagtttgtattttttttacttacctaattttaaatcattctagctattttatttcttctctgACACACCACCAACCACCATGGAGGTAATACCTACTAATCCTAACTCTTCCTTGCCGCCACCACCACAACCTTTTCCAATAAGCCCAGCTATGGCTCCATCTGTACAACTCGGTGTCACCATAGTTTACACATGTCTGTATGGAGGTTTGTTCTTAATAGTATACGCTCAGCTTTGGCTGTTGTTACTCTACCGCCACAAAAGATGGAGCTACCAGAGtgcttttcttttcctctgtttGTTCTGGGCGGCACTCCGCACTAcgcttttttccttttattttggtAATGCTCTGGCAGCCAACCACCTGCCCACCCCAATCTACTGGCTCCTCTACTGCTGTCCTGTGTGCCTGCAGTTCTTCACTCTGAGTCTCATCAACCTGTACTTCACCCAGGTTTTGTTCAAAGTTAGAGGGTTATTCAATATTGAACCCAGTAAAGGACTATGGGCAGCTCGATGTATGTATGCATCTATGAGCATTGTCTTTTTATGCGTCAACATGGTTTGCGCCAGCTTAGGAGATCGTGGGGGCTCCGGTGGAATTGGGGCCAAAACATGGAGGCTGGTACTGGTCCGAGTCTTGGTGAACGATCTGCTTTTCATCATAGAGGCTGTGTGTCTGGCCAGTTCACTGCTTCTCTTGACCCGTTTCTCTCCATCCACCAGCCCTTATTTGCACAGCAAGGGAACATCTCTTTGCCGGACAGCAGTGCTTGGAGGTGGTGTAATCCTGCTATTTTCAAGCAGAGCATGTTACAATCTTACTGTGCTTATTCTGTCACAGAAATATAAGGTAGCATCTTTTGGCTTTGACTGGTACAACATCTCTGATCAGGCTGACCTTCGCAGTGAGCTTGGAGATACAGGGTACATAGTGTTTGGGCTTATTCTTTTCATATGGGAGCTTCTACCTACCAGCCTGCTTATTCTAATTTTCCGAGTACCTCGGCCACCACAAGAAACGaATTGCAGTCCAGCAATCAACACAAGAGGACCACGCTCATATTTCTTTGACGACCCACGTGGGATGGATAGTGATACTGGTTCTACTTGGACACATGGCTTGCGGCCCAACAACAGCTGGTTTGGTTCCAGTGAGACAACTCCACTCCTCTTCAACAGGACAGATCAGAGCAACCAGCATCACTCCCTTTACTCAACTCCACAGAATTAAGCTCTCCACAGGGACAAGGCATAAGGGATTTGTCTCTGATCTGATTCTCAGGCAGTACTGTATCAGTACCTCATCCTGTGGACACCAATTGGTATCATTTGCACTGACGCGCTGTACACCTGCTTGCACCTTGCATTTTTCAATTTTATAACTGTTGACAGAACTAAGACATTCTTCTAacttaatatcttaatatctgtACCAGCAATTTAAAGGGATGTGCAGGCTCTCCCCTGTTTACATAAATGAGGACCAATAACCTGTTTCTGTAGGTTAATGTAATGAAGCTTTAGTGGAATGAACTCACCTTTGTATTTATCGTTTTAATATATCTACTCTTTGCTTTCAAACAACTGACAAATGTGAatgaatgattgattgattaattaatctaaattattttataatatttcataAAGGGAACAATGACAGATTTTGATCATAttctactgtatttaaaaatgattttatagCATTAAATGTGCATAATGAATTTTACATAACTTGAGATTTTTCCTATAGAATTACATATTTTCCTACAGTGTAATGATATTAACTGAAAAACAATGAGTAATTTGAATTGACCAGTTTATTCTGCAGTATGTACATATTCTCCTATTAAAACActttatacagta

Function

NR:

description
PREDICTED: integral membrane protein GPR137-like isoform X3

GO: NA

KEGG:

id description
K22989 GPR137; integral membrane protein GPR137

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684050.1 True 2514 mRNA 0.40 8 37280841 37285730

Neighbor

gene id symbol gene type direction distance location
LOC103033714 si:dkeyp-110e4.11,LOC108416539,LOC107741102,LOC107664778,LOC107717397,LOC107598365,LOC108268417 coding downstream 62550 37206239 ~ 37218291 (-)
LOC111195788 NA coding downstream 174384 37100295 ~ 37106457 (-)
polr2g polr2gl,POLR2G,rpb7,polr2g,LOC106604162 coding downstream 193862 37083976 ~ 37086979 (-)
eef1g eef1g coding downstream 198635 37072586 ~ 37082206 (-)
LOC103034997 NA coding downstream 242110 37003908 ~ 37038731 (-)
ccdc69 ccdc69 coding upstream 106340 37392070 ~ 37407429 (-)
gm2a gm2a coding upstream 128862 37414592 ~ 37421150 (-)
LOC103027906 LOC108416579,LOC108269025,LOC107662007,LOC107741056,LOC107664772,LOC107717388,LOC102314633 coding upstream 272964 37558694 ~ 37625939 (-)
glra1 glra1,LOC107717398,LOC107662012 coding upstream 408323 37694053 ~ 37776716 (-)
thoc3 thoc3,LOC107664783,LOC107662035,LOC107598370 coding upstream 758291 38044021 ~ 38048482 (-)
G210197 NA non-coding downstream 52229 37228261 ~ 37228612 (-)
G210173 NA non-coding downstream 152636 37127694 ~ 37128205 (-)
G210169 NA non-coding downstream 172752 37107700 ~ 37108089 (-)
G210120 NA non-coding downstream 408897 36871579 ~ 36871944 (-)
G210107 tdg,LOC107574736,LOC107679604 non-coding downstream 458735 36815671 ~ 36822106 (-)
G210223 lman2 non-coding upstream 13384 37299114 ~ 37301802 (-)
G210235 tmed9,LOC108416549,LOC107662005,LOC107664780,LOC107741051 non-coding upstream 23648 37309378 ~ 37314616 (-)
G210242 NA non-coding upstream 37677 37323407 ~ 37323626 (-)
G210306 NA non-coding upstream 299856 37585586 ~ 37586656 (-)
G210314 NA non-coding upstream 341109 37626839 ~ 37629906 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other downstream 76456 37165034 ~ 37204385 (-)
c24h12orf73 NA other downstream 470345 36809307 ~ 36810496 (-)
G210059 NA other downstream 570098 36710420 ~ 36710743 (-)
LOC103045435 asb5a,LOC108425000,LOC107602595,LOC107740119,LOC107569834,LOC107723803 other downstream 2521750 34709771 ~ 34759091 (-)
egf NA other downstream 2624357 34620461 ~ 34656484 (-)
LOC103035726 LOC103035726,LOC108416673,LOC108268898,LOC107730672,LOC107601515,LOC107550867,LOC107680594,LOC107756447 other upstream 2241903 39527633 ~ 39540816 (-)
bend4 bend4 other upstream 2327985 39613715 ~ 39632176 (-)
atp8a1 atp8a1 other upstream 2357814 39643544 ~ 39795943 (-)
LOC103023530 LOC103023530,LOC108418701 other upstream 2647386 39933116 ~ 39940055 (-)
G210991 LOC103042126,LOC108416825 other upstream 3075528 40361258 ~ 40363237 (-)

Expression


Co-expression Network