mlkl


Basic Information

Item Value
gene id mlkl
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 39911444 ~ 39921834 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684123.1
TTAGTTTAGATTGTAGTTTTCGTCTGCTGAGGAAAGAAGTACAAGAAGCAGAGCAGACCATGGATCTCATAGACCCCATCCTGGGCTTAGCGGAGAAGTTATACTCCCTGTGTGAGGAGGTGAAAGCCAACAAGAAGAGATGTAGGCGGCTGGCTAAGCGTGTGTCTGAACTGGCTATGATGGTGAAGGCAGTGAAGGAGCAGGGTCTGGGCAGAGAGCCGGAGCTGGTACAGAAAGGCCTGCAGGAGCTCAAGCGGACCCTTGAGAAGGCGGAAGACATGGTGAAGAAATACGCCTCGTCCAGCTGTCTCAAGCGCATTGTGAAGGCCTATGACCTTGGTGAAGATTTCGGCTGTCTGAATAAGAGATTGAACGATGCTGCCCAGCTTCTCTCACTGGCACTGCAGGTGGAGCAGAGGAAGAGGATGGAGGAAGTGTTCCAAGAGGCCAGGAGAATAAAAGAGGATGAAGAAGACTCAAAAAGTGACCGTGAGGAGCTCCGAAACTTGCTCCAGTTATTAGCAGTGGAGAATCAAGAGACCAAGGTGAGCGTGGAATCTGTGAACACGAAAATAGATCAAACTAACAAAGACATTCAGGACATCAAGCACATCCTGGATTCATTGAGAAGACCCAGCATTCATCTGCAGGCCATCAGAGAGATCAGGCCAGAGGAGATCACCTACGACCATCCCAAAGAGCCAATCATGAAGTGCTGCAATTCTGAGCTGTACAAGGGGGAGTACAACAAGTTCATTGTAGTTGTCAAGAGATACACATATCCTGTGAGCATCAGCCCAAGCCAAGTGAGGTGCATTTTTAACAAAGAGGTGGAAaccatgaagtgctttgagtcACCAAATATCCTACGAATGTTCGGGATCTGTGTCCAAGATGAAAATGGACCAAACCCAAACTTTCTGATAGTGATGGAGTTCTGTGAGAAGGGCTCTCTGAGGCAAGTGCTGGACAGTTCCAGCAGACTGCTCTGGGACAGAAAGATCCAAATGTGTCTGGACGCAGCTCAAGGGCTTTACAGGCTGCACCAGACTGAGGAAAACTTTAAGGTGCATGGCTGCATCACCAGCAGCGGATTTCTGGTGGCTGCTGGCTACAGAGTAAAGctgGGTGGCTTTGAGCTGGCAAAAACAGCAACGTCACTTAAAAGGAGTAACAGTAAGAACAGCAGCTCAATGATCTACACCTCTCCACAACAGCAGGAAAACATCAACCATACATATGACAAGGCCTGCGAGATCTACAGTTTTGGCATAGTCCTGTGGGAAATTGCAACACGAGAAGTCCCTTTTAAAGACTGCAAGTCCCGCCATGAGATCTATGAGAAAGTTTGTAAGCAGAAGATAATGGAGCCACTACCAGATGACTGCCCGAGGGAGCTTAAAAACCTCATTAACGCCTGCCGCTCCTACAATCCCTTTCAGAGGCCTGATGCAGGAGtgTTAGTGGACAAGCTACGTAAACTGGCACAGCAGTATGAAGAGGATTAATGCTTCAGTATTGGTTCTCCCTCTGCTGAGCGGCACACCTACAGCCTGGACCCAGACAATCAGTTGCTGTGGATGCAGGCTCTCTGAATGAGACTTTATCCAGACATTCTTTGTACAGCCTGGTGTTTACTTAGCTGCCTTTTCTACTTCATTACGAGCTGAGCTGACTGTTTGCACCCCAAAGGGAAAGACTTCCTAAACACAGACTGAGCCTAAACTGGATTTAGGTAATGCTGCCAATATACTGTTCTATAGATGTTCTATATAGACATCATTCATTTGTATATgatatttgttttggtttgttatgGGAGCATTTTTGTTACAGCAGATGACACTGCAACCACCTTTAAAGGCCactttttatgaaataaaaaaaagtgtgagcaacttttagaaagaaaattgtattaaatttgcATTATGTA

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K08849 MLKL; mixed lineage kinase domain-like

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684123.1 True 1936 mRNA 0.46 11 39911444 39921834

Neighbor

gene id symbol gene type direction distance location
LOC103024376 NA coding downstream 3653 39889497 ~ 39907791 (-)
LOC103024693 LOC103024693,LOC108418564 coding downstream 24607 39882684 ~ 39886837 (-)
LOC103025209 adam19,LOC103025209 coding downstream 31991 39844601 ~ 39879453 (-)
LOC103030807 NA coding downstream 68869 39836297 ~ 39842575 (-)
slc30a9 slc30a9,LOC107756435,LOC107680574,LOC107550859 coding downstream 75673 39825313 ~ 39835771 (-)
LOC111195796 NA coding upstream 1364 39923198 ~ 39926645 (-)
LOC103024064 LOC108416404 coding upstream 6730 39928564 ~ 39931679 (-)
pdia3 pdia3,LOC107696263,LOC107716732,LOC107753598,LOC107573964,LOC107661453 coding upstream 60960 39982794 ~ 39988361 (-)
LOC103022288 ckmt1,LOC103022288,LOC108418758,LOC107753597,LOC107661454,LOC107554962,LOC107696262 coding upstream 73674 39995508 ~ 40008594 (-)
LOC103047731 abhd2,abhd2b,LOC108418794,LOC107753686,LOC107665722 coding upstream 100703 40022537 ~ 40034090 (-)
G210800 NA non-coding downstream 91541 39816624 ~ 39819903 (-)
G210799 grxcr1,si:dkey-109l4.6,LOC102787492 non-coding downstream 97880 39813339 ~ 39813564 (-)
G210772 LOC108418277,LOC108268893 non-coding downstream 407038 39503698 ~ 39504406 (-)
G210764 scyl1,ganab,LOC107741476,LOC107756491,LOC107601512 non-coding downstream 410511 39463107 ~ 39500933 (-)
G210873 NA non-coding upstream 113729 40035563 ~ 40036100 (-)
G210868 NA non-coding upstream 132889 40054723 ~ 40055218 (-)
G210934 NA non-coding upstream 150551 40072385 ~ 40074768 (-)
G210937 NA non-coding upstream 184770 40106604 ~ 40108923 (-)
G210949 NA non-coding upstream 216042 40137876 ~ 40138308 (-)
atp8a1 atp8a1 other downstream 115501 39643544 ~ 39795943 (-)
bend4 bend4 other downstream 279268 39613715 ~ 39632176 (-)
LOC103035726 LOC103035726,LOC108416673,LOC108268898,LOC107730672,LOC107601515,LOC107550867,LOC107680594,LOC107756447 other downstream 370628 39527633 ~ 39540816 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other downstream 2707059 37165034 ~ 37204385 (-)
c24h12orf73 NA other downstream 3100948 36809307 ~ 36810496 (-)
LOC103023530 LOC103023530,LOC108418701 other upstream 11282 39933116 ~ 39940055 (-)
G210991 LOC103042126,LOC108416825 other upstream 439424 40361258 ~ 40363237 (-)
G210995 NA other upstream 450971 40372805 ~ 40378353 (-)
LOC103026726 cnot4,cnot4a,LOC107661486,LOC107753567,LOC107590814 other upstream 636850 40558684 ~ 40570148 (-)
LOC103035761 LOC108419823,LOC103035761,LOC105018411,LOC103373780,LOC104940444 other upstream 1237396 41159230 ~ 41219443 (-)

Expression


Co-expression Network