c24h15orf40


Basic Information

Item Value
gene id c24h15orf40
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 40246606 ~ 40249542 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684132.1
GTATTGACTCCACGCACATTAAGCTTTCACGCCATGCGCAGTGTATACGCTCGTAGTAGTCTATTGAGTTTACATTAGCTTGCTGCACCTTATTAATATTTCTACCTGTCCTGTTCAGCCGCCGTCTGTCTGAATGATCTGAAGCCCTGTAAACCCATGAGCTGTCAGACTGCACGCTTCTGTTTCAGAAGTATAGGGTTATTTACACAGTGTGAAAGGAGCTGTGGGGTTGAGAAGTCCTCACTGTTTACTGGCGTTAACCAGCTGAGCCTACAGAGGAGCTTCTCTCAGAGTAAAATGCCCAAAAAAGATAAAACGAGTAAGAGCACTCAGAAGCAGCCGGAAACTCCAGCTGGTCCCGTTTCAACACTTAAAGACGGCCAGCTTGCAATTTCAATCCACGCTAAACCCGGAGCAAAACAAAATGCTGTTACAGATGTGTCCTCAGAAGCAGTGGGGGTCGCTATTGCTGCACCACCGTCTGAAGGAGAAGCCAACGCGGAGCTGGTGCGGTATTTATCCAAAGTGCTGGAGCTGAAGAAGAGTGAAATCGTGTTAGATAAGggtAGTAAATCAAGAGACAAAATCATTAAAGTCTCTGCGTCTATTAGTAAAGAGGAGGTGCTGGAAAAACTGCAACGGGAAGCTGCTAGCTAAGGGCACTAAGACTGCTGGATTGTTCCCTCTTCTGTCCCTAAGCAATTGACACTGGAATCCTAAAGCAGCCTTTTACTCCTGGGGATTTATATCTGACTGTATAGTTCACATATTCCTGACCTCTTTGATTAGGAGGATATTATGTGTCGGATTAGAGTTGGAGTGTGTAAATTGCCAAGAGCAAGACTTGGTATCCCTTAATGTATCAGTAACAGTCTTTATTTTGTGCCACACACATTTCTTTCCAGTGGGAATCGGTGAGTATACTTAAAGAAGTGTGATATGAGTAATGCACCGATTTAATGCATATCCTAGCTTTTGAGCAGTAGCAATATCTCTTGCTTCATTTTTCAAACTTATCATGCTGGATGGAATCAACATTCTGGGACATTTCAAGCTCTCCATGCTtttgatataattactgtatatcaGTGGCTCGATGCTTCTGTCTTTGAGTAATGTGTTTAATTAAGGATAGACCTAATGAGCATAGCTATTAGAGGATTTCCATTAAGAAATGCACCCACCACTAGATAACTTAATTTAAATTCCTTTTGGACTGTTCATTTCCACAACACCAAATAAAAGGGTTTTAATTgtttcaaatttaaataatgggAGTATGATTCAAGCTGGTTTTAGTAATTAAACATAAtggattcattttaatattttatgatttttgtcTTGGGCATGTTTAAGGTGATAAGGATAAAGGccttaaatgttcttttttatttctttgttttgtctttttttttggcgaaatttcagtacagtaatgtaatgtttatcaattcagtaacattatttaaattataggAGGGTTGGTTTTACATCAACCAGAACATAAAAATTACAGAGAACaccaatttaattttttttatcactcaTAACCAGTGagcacaaataaaaatgtgttccaCCCAA

Function

GO: NA

KEGG:

id description
K09131 K09131; uncharacterized protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684132.1 True 1587 mRNA 0.39 4 40246606 40249542

Neighbor

gene id symbol gene type direction distance location
cartpt cartpt,LOC107679585,LOC107574592,LOC107666283 coding downstream 16297 40228839 ~ 40230309 (-)
LOC103046604 LOC108418995,LOC108268792,LOC107753548,LOC107666287,LOC107716682 coding downstream 25872 40165500 ~ 40220734 (-)
LOC103029855 NA coding downstream 148646 40076837 ~ 40097960 (-)
LOC103047731 abhd2,abhd2b,LOC108418794,LOC107753686,LOC107665722 coding downstream 212516 40022537 ~ 40034090 (-)
LOC103022288 ckmt1,LOC103022288,LOC108418758,LOC107753597,LOC107661454,LOC107554962,LOC107696262 coding downstream 238012 39995508 ~ 40008594 (-)
LOC103042952 LOC103042952,LOC107695597,LOC107577899 coding upstream 52617 40302159 ~ 40307383 (-)
LOC103043462 sycp3,LOC103043462,LOC107666284,LOC107590858,LOC108269409 coding upstream 58952 40308494 ~ 40312741 (-)
actr6 actr6,arp6 coding upstream 63342 40312884 ~ 40317812 (-)
gtse1 NA coding upstream 69247 40318789 ~ 40325440 (-)
LOC103045095 LOC103045095,LOC107590823,LOC107753557,LOC108268426,LOC106608917,LOC101062121 coding upstream 78297 40327839 ~ 40355276 (-)
G210959 NA non-coding downstream 83056 40163333 ~ 40163550 (-)
G210949 NA non-coding downstream 108298 40137876 ~ 40138308 (-)
G210937 NA non-coding downstream 137683 40106604 ~ 40108923 (-)
G210934 NA non-coding downstream 171838 40072385 ~ 40074768 (-)
G210868 NA non-coding downstream 191388 40054723 ~ 40055218 (-)
G210994 NA non-coding upstream 121987 40371529 ~ 40372033 (-)
G211001 NA non-coding upstream 202700 40452242 ~ 40452572 (-)
G211025 NA non-coding upstream 249752 40499294 ~ 40500630 (-)
G211026 NA non-coding upstream 251657 40501199 ~ 40504302 (-)
G211029 NA non-coding upstream 262094 40511636 ~ 40512067 (-)
LOC103023530 LOC103023530,LOC108418701 other downstream 306551 39933116 ~ 39940055 (-)
atp8a1 atp8a1 other downstream 450663 39643544 ~ 39795943 (-)
bend4 bend4 other downstream 614430 39613715 ~ 39632176 (-)
LOC103035726 LOC103035726,LOC108416673,LOC108268898,LOC107730672,LOC107601515,LOC107550867,LOC107680594,LOC107756447 other downstream 705790 39527633 ~ 39540816 (-)
LOC103033395 arap3,LOC107563596,LOC107717393,LOC106939943 other downstream 3042221 37165034 ~ 37204385 (-)
G210991 LOC103042126,LOC108416825 other upstream 111716 40361258 ~ 40363237 (-)
G210995 NA other upstream 123263 40372805 ~ 40378353 (-)
LOC103026726 cnot4,cnot4a,LOC107661486,LOC107753567,LOC107590814 other upstream 309142 40558684 ~ 40570148 (-)
LOC103035761 LOC108419823,LOC103035761,LOC105018411,LOC103373780,LOC104940444 other upstream 909688 41159230 ~ 41219443 (-)
LOC103037199 tmem60,LOC108416913,LOC107661463,LOC107578479,LOC107753588,LOC107696252 other upstream 1057404 41306946 ~ 41310751 (-)

Expression


Co-expression Network