G50921


Basic Information

Item Value
gene id G50921
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 776284 ~ 776509 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU57949
CCAGGATGACCCACATGTTTTTTTTTTTTTGTGTTGTGGTTGTTGTTCATGAGTCCTTGTTTGTCTTGAGCAGTTAAACTGCCCAATCTAAACTTTTCACTTAGGCCTACTTTTTTCAAAAGATTAATGGGATTTTAAATAAAGACATAATTTTATTTTTGTATGTTATGTTATCTACATTGTGTTTTGGCTACTTGTGACTTTAATGAATATGACATTGATCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57949 True 226 lncRNA 0.31 1 776284 776509

Neighbor

gene id symbol gene type direction distance location
CI01000009_00719164_00724772 SRPX coding upstream 51233 719164 ~ 725051 (+)
CI01000009_00704243_00710805 NA coding upstream 65479 704065 ~ 710805 (+)
CI01000009_00620687_00621072 NA coding upstream 154747 620687 ~ 621537 (+)
CI01000009_00611583_00617762 TFG coding upstream 158522 611305 ~ 617762 (+)
CI01000009_00608513_00609159 JAGN1, JAGN1A, JGN1A coding upstream 166909 608513 ~ 609375 (+)
CI01000009_00805606_00808374 NA coding downstream 28395 804904 ~ 808404 (+)
CI01000009_00852319_00853083 CX45.6 coding downstream 74733 851242 ~ 853461 (+)
CI01000009_00913995_00916434 COMMD6 coding downstream 137486 913995 ~ 916565 (+)
CI01000009_00920570_00955979 TBC1D4 coding downstream 143919 920428 ~ 956574 (+)
CI01000009_01034561_01035452 KLF12 coding downstream 258052 1034561 ~ 1035728 (+)
G50917 NA non-coding upstream 16011 757122 ~ 760273 (+)
G50913 NA non-coding upstream 20113 746194 ~ 756171 (+)
G50911 NA non-coding upstream 31106 742001 ~ 745178 (+)
G50909 NA non-coding upstream 40259 735727 ~ 736025 (+)
G50879 NA non-coding upstream 46464 728863 ~ 729820 (+)
G50973 NA non-coding downstream 10375 786884 ~ 787490 (+)
G50978 NA non-coding downstream 23118 799627 ~ 799859 (+)
G50984 NA non-coding downstream 61431 837940 ~ 840919 (+)
G50947 NA non-coding downstream 97593 874102 ~ 877421 (+)
G50954 NA non-coding downstream 101762 878271 ~ 881321 (+)
G50920 NA other upstream 6051 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 680497 94371 ~ 97230 (+)
CI01000009_01431700_01434463 NA other downstream 646338 1429873 ~ 1435328 (+)
G51122 NA other downstream 903637 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 1117726 1897343 ~ 1919516 (+)
G51274 NA other downstream 1478590 2255099 ~ 2350486 (+)
G51529 NA other downstream 2285524 3062033 ~ 3062587 (+)

Expression


Co-expression Network