LOC103031696 (ano1,LOC105911290,LOC106573096)


Basic Information

Item Value
gene id LOC103031696
gene name ano1,LOC105911290,LOC106573096
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 27026494 ~ 27233590 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684354.1
ATGAAAGTGCTGCTGTATGAGGAGTGGGCAagttacagtgttttttataaatatcagCCCATCGGCCTTATCAGGAAGTATTTTGGAGAGAAGATCGGATTGTACTTCGCATGGCTGGGTATTTACACCCAAATGCTGATTCCTGCCTCTATTGTTGGTGTAATTGTGTTCCTGTATGGCTGTGTTACCGTGGATGACGATATCCCCAGtatGGAGATTTGTGACAGGAGGAGGAATATAACGATGTGTCCTCTGTGTGACCGGGTATGCAGTTACTGGACTCTGAGCTCTGCATGCGGGACGGCGCGTGCTAGCCACCTTTTCGACAACCCTGCCACTGTCTTCTTCTCCATCTACATGGCTCTGTGGGCTGCATTTTTCATGGAACACTGGAAGCGAAGGCAGATGCGTCTGAACTATGAATGGGATCTTACAGGctttgaggaggaggagGACCATCCTAGAGCAGAGTACGAGTTTAAACTGATGCAGAAATCTCTTAAAAAAGAACTGAATGCACATAAGAGgctggagaaagagaaactgaCATGTAGAGACAGATGTCCAGCTTATTTGACTAATATTGTTATGATGCTTTTGATGATTGGTGTGACATTTGCTATTGTGTTTGGGGTCATCCTGTACCGAATCTCTACTAAAGCAGCACTGCACATGAGCTCCAACCCCACCACCCGCTCCAACGTGCGGCTCACTGTCAAAACTACTGCCGCCATCATCAACCTGGTGGTTATCCTAATCCTAGACGAAGTGTATGGCACAGTGGCCCGCTGGCTCACTGTTCTGGAGGTACCAAAAACAGATAAGAGCTTTGAGGAGCGACTGATCTTCAAAACCTTCATCCTAAAGTTTGTGAATGCGTTCACCCCCATCATTTACATTGCCTTTTTCAGAGGCAGGTTGGTGGGTCGTCCTGGCAGCTATCTTTATGTGTTTGAATCATATCGAATGGAGGAGTGTGCACATGGTGGCTGCCTGATGGAGCTGTGTATTCAGCTTAGCATCACCATGCTGGGaaaacaactcatccagaacAACCTATTTGAGATTGGCATACCtaagttgAAGAAGCTGATTCGCTACATAAAGTCGAAGCGAAACGCGTTTCAGGAGGAAGAGCGTGAGAAAAAACTGCAACGCTACGAGACTGATTACTTCCTGGAACCCTTTGCCGGTCTCACCCCTGAGTACATGGAGATGATTATCCAGTTTGGCTTTGTGACGCTGTTTGTGGCCTCATTTCCACTGGCGCCACTGTTTGCCCTCCTTAACAACATCATTGAGATCCGCTTGGATGGCAAGAAGTTTGTGACGGAACTCAGGAGGCCGGTCGCGGCTCGGGCCAAAGATATTGGGATCTGGTACAACATCCTGAGAGGTGTGGCAAAAATAGCAGTTATAGTGAATGCCTTTGTCATCTCCTTCACCTCGGATTTTGTCCCCAGGCTGGTTTATCAGTACATGTATAGTTCTGACGGTTCTATGCATGGCTTCGTAAACCACACTCTATCCTACTTTAATGTCAGCCATTTCCAGAATGGAACAGCCCCCATGGAGCCGGATCACCTTGGCTTTCATGTGGACATGTGCAGATATAAGGACTACAGAGAACCCCCATGGTCTCCAATGGCGTACACAGTGTCTAAAGAGTTCTGGTCAGTTCTGGCTGCTAGACTGGCCTTTGTCATCGTCTTTcagAATATAGTGATGTTAATGAGTGATGTTGTGGACTGGCTTATTCCTGACATCCCAAAAGACATCAGCCTGCAGATCCACAAAGAGAAAATCCTGATGGTGGATCTCTTCATGAAGGAGGAACAGGGGAAGTTGCATGACCTCGATAACATGGTGGCTggtggagagaaaaacaacttTGCCCACGGTCCACAGCTCCACCCACGAGCCATCTCACATACACAGAGCAACAGCTTTTAGTATatagcaagtgtgtgtgtgtgtgtgtgtttgtaataaCATTCCTCTGACTCACAGCCATGCCTGAAGACTGAGAGCAGGGCTTAGGACCAGACTCACAACTTAACTGAGTGCTGTTTTCCTCcgacagtccaaaaacatggagatcgaATGAATTAGTTACTTAGTTATAAATTGCCCTGGTGTGTCAAAATAAGAGTGTATGCCACCTGCCCCATAAAATACAGAATCGTCTTTTATTTGGCAATCAAACATTGGTTCCATATGGGACGCAGTTTGTTCCATATTTCCATAAATATCTAATCCGCATGTCTGTTACACACAGATCA

Function

symbol description
ano1 Enables calcium activated cation channel activity; intracellular calcium activated chloride channel activity; and iodide transmembrane transporter activity. Involved in cation transport; inorganic anion transport; and positive regulation of insulin secretion involved in cellular response to glucose stimulus. Located in apical plasma membrane and nucleoplasm.

NR:

description
PREDICTED: anoctamin-1-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684354.1 True 2282 mRNA 0.46 17 27026494 27233590

Neighbor

gene id symbol gene type direction distance location
LOC111195857 NA coding downstream 73021 26951689 ~ 26953473 (-)
LOC111195856 NA coding downstream 77124 26946294 ~ 26949370 (-)
kitlg NA coding downstream 211035 26792762 ~ 26815459 (-)
cep290 cep290 coding downstream 311241 26673606 ~ 26715253 (-)
LOC103031232 arntl1a,LOC108439331,LOC107707455,LOC107753525,LOC107665721,LOC108269000 coding downstream 386271 26613862 ~ 26640223 (-)
tmem231 tmem231 coding upstream 923177 28156767 ~ 28163353 (-)
adat1 NA coding upstream 943550 28177140 ~ 28193065 (-)
nup160 nup160,LOC107555692,LOC107756876 coding upstream 1077276 28310866 ~ 28367957 (-)
rpl27a rpl27a,LOC107687759,LOC108439055 coding upstream 1238931 28472521 ~ 28476854 (-)
psma1 psma1,LOC108439057,LOC107748950 coding upstream 1249901 28483491 ~ 28489434 (-)
G208487 NA non-coding downstream 15382 27008167 ~ 27011112 (-)
G208481 NA non-coding downstream 34566 26991493 ~ 26991928 (-)
LOC111195768 NA non-coding downstream 70044 26954767 ~ 26956450 (-)
LOC111195769 NA non-coding downstream 75170 26950914 ~ 26951324 (-)
G208455 NA non-coding downstream 132444 26885476 ~ 26894050 (-)
G208542 NA non-coding upstream 30986 27264576 ~ 27264959 (-)
G208551 NA non-coding upstream 901551 28135141 ~ 28135342 (-)
G208640 NA non-coding upstream 975805 28209395 ~ 28209959 (-)
G208647 NA non-coding upstream 1052942 28286532 ~ 28286897 (-)
G208649 NA non-coding upstream 1057019 28290609 ~ 28292211 (-)
G208394 borcs5,LOC107753635 other downstream 370310 26655443 ~ 26656184 (-)
G208046 NA other downstream 813653 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 908862 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 938079 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 939990 26079764 ~ 26086504 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 982805 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 1428593 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 1549493 28783083 ~ 28860774 (-)
G209090 NA other upstream 2790371 30023961 ~ 30024550 (-)
G209127 NA other upstream 2928867 30162457 ~ 30162973 (-)

Expression


Co-expression Network